Colletotrichum fioriniae: CFIO01_09589
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Entry
CFIO01_09589 CDS
T04796
Name
(GenBank) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CFIO01_09589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_09589
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_09589
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CFIO01_09589
RNA polymerase I system
CFIO01_09589
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CFIO01_09589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
Spt5_N
KOWx_SPT5
KOW5_SPT5
CTD
KOW4_SPT5
KOW2_Spt5
KOW1_SPT5
KOW
Cornifin
Motif
Other DBs
NCBI-ProteinID:
EXF76040
UniProt:
A0A010QH35
LinkDB
All DBs
AA seq
1041 aa
AA seq
DB search
MSSNRYDDSEEEDDFNPAPADLSDEEPDQPASDNHARESSPADDAPAPSKSRVIEDDDEE
DEDDAGQHDDDDEEEDEDDEDEDDVQQGHRRKRRKDRRAAFFDIEAEVDDEEDGEDEEKD
GEEIEDFIDNAHPDDIAESGGLDDDRRHRELDRRREMEASMDAEKQAEILRQRYGNRRPN
KGFGDSAVVPKRLLMPSVDDPTIWAVRCKEGKEREVVFSIMKRIEERLGTKDELAIISAF
ERGGPTSVMKGYIYVEANRSTDIMVALDGMFNVYPRSKMILVDIKDMPDLLRVTKTPTLE
PGAWVRLRKPAKHAGDLAQVIDVTENGLEARVRFIPRLDYGMRDDALSAVTADGKRKRPV
GVAGPRPPQRLFNETEARKRHPRHIQGNPTTKVWNYMGDEFENGFQVKDIKIQQLVVTDV
NPTLEEVTRFASGAEDGTENLDLKALASSLKDSNINVTYLPGDIIEVYEGEQKGVVGKAT
NVQGDIVTMQVTEGVLAGQIIEVPTKGLRKRFRIGDHVKVTSGSRFRDEVGMVVKISEDR
VTFLTDQTNTEVTVFSKDLREASDIGGQGSLGQYELFDLVQLDPTTVGCIVKVDRESVMV
LDQNGDTRQVMPSQIANKLPKRKIAVAADRNGSEIRLDDVVREYGGQQRQGKIIHIHRAY
LFLHNTDSNENAGVFVTKAGNVNTIAAKGGRVLSAGPNLDQMNPAMKRNPNGSESKMAPP
KSFGGRDRAIDKTVIIRKGGYKGLLGIVKDATDTHARVELHTKSKTITVPKDHLSFKDRI
TGAKIEINGRGGRGGHSGPPGGGRGGHGGDWQGGRTPVASGGPERTPAWGSRTPAPTGGR
TPAWKSSGPDYGGSRTPAWADGSRTAYGDGNRTAYGGGSRTPAWQSGAKTPAHDAFGLGS
KTPAYGGGDAWGSGSKTPAYGSAPTPGASGGDSWGYTPGNSYDAPTPGGALLSAPTPGAL
NAPTPGAYSAPTPGAASAPTPGGGWQGGWGADSAPTPAAGAPTPAASGFNSSSAYYGAPT
PAAYGAPETPAASGPRYTDDD
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaaccgctatgacgactccgaggaggaggatgacttcaaccctgcgcccgcc
gacttgtccgatgaggaacccgaccaaccagccagcgacaaccatgctcgagaaagcagc
cctgctgacgacgcacctgctccctctaaatcgagagtaatcgaagacgacgacgaagaa
gacgaagatgatgcgggccaacacgacgacgacgatgaagaagaggatgaggacgacgag
gacgaagacgatgttcaacagggacatcgtcgcaagcgcagaaaggatcgccgagccgcc
ttcttcgatatcgaggccgaagtcgacgacgaggaggatggagaggatgaggagaaagac
ggcgaggagattgaagacttcatcgacaatgcccatcccgacgacattgctgagagcgga
ggcctcgatgatgacagacgtcacagagagttagaccgtcggcgcgagatggaggcgagt
atggacgctgaaaagcaagccgaaatccttcgacagcgttacggcaaccgccgcccgaac
aagggctttggagactcggccgtcgttcctaagcgcctgctgatgcctagtgtcgatgat
cctaccatctgggctgtcagatgtaaggagggcaaggagcgggaggtggtcttctccatc
atgaagcgtatcgaagagagacttgggactaaggacgaactggccattatttcggctttt
gagcgcggtggcccgacctccgtcatgaaaggctacatctacgtcgaagccaatcgctct
accgatatcatggttgctctcgacggcatgttcaacgtctacccgcgatccaagatgatt
ctcgtcgatatcaaggatatgcccgacctgcttcgtgttaccaagacccccacactggag
cccggcgcgtgggtgagactccgcaagcctgccaaacacgctggcgatcttgctcaggtc
atcgacgtcactgagaacggcctcgaggccagagttcggttcatccctcgtctcgactac
ggaatgagagacgatgcgctgtcggcggtgactgccgacggcaaaagaaagcgacctgtc
ggtgtagcgggcccgcgcccacctcagcgcctcttcaacgagaccgaagctcgtaagcgg
catccgagacatatccagggtaatcccaccaccaaggtgtggaattacatgggcgacgag
ttcgagaacggctttcaagtcaaggatatcaagatccagcaactggtggttacggacgtc
aacccgaccctggaggaggtcaccaggtttgcctccggtgctgaggacggcactgagaat
ctcgacctgaaggctttggcatcgagcttgaaggacagcaacatcaatgtcacctacctg
cctggggacattatcgaagtctacgagggcgagcagaagggcgtggttggcaaagccacc
aacgtccaaggtgacattgttaccatgcaagtcacagaaggagtattagccggacaaatt
attgaggtgccgaccaaaggcctgagaaagcgtttcaggattggagatcacgtcaaggtt
actagcggcagtagattccgcgatgaagttggtatggtcgtcaagatctcagaagaccga
gttactttcttgaccgatcaaaccaacaccgaagtcaccgtcttcagcaaagatttgcgg
gaagctagcgacatcggaggacagggctcgctgggtcagtacgagctgtttgacctcgtc
cagctagaccccacgacagttggctgtattgtcaaggttgaccgtgagtcggtgatggtt
ctcgaccagaatggagacacccggcaagtcatgccttcgcagatcgccaacaaactgccg
aagaggaagatcgccgtggccgccgatagaaacggctccgaaatcagactcgacgacgtg
gtgagggagtatggcggtcagcaacgccagggcaagattatccacatccaccgtgcctac
ctcttccttcacaacaccgacagtaatgagaacgctggcgtttttgtgaccaaggctgga
aacgtcaacacaattgcggccaagggtgggcgtgtgctttcagccggtcccaacctagat
cagatgaatcccgccatgaagcgcaaccccaacggatctgagagcaagatggcaccgccc
aagagttttggaggacgtgatcgtgctatcgataagacagtcattatccgaaagggcggt
tacaagggtcttttgggaattgtcaaggatgcgactgacacacacgctcgtgtcgagctg
cacactaagagtaagacaatcactgtacctaaagatcacttgagcttcaaggatagaatc
acaggagccaagattgaaatcaacggtcgtggaggtcgtggtggacacagtggtcctcca
ggtggtggccgtggaggacatggaggagactggcaaggaggccgaactcccgttgcctct
ggcggcccagagagaactccggcatggggctcaaggactcctgcacctaccggtggtcgc
acgcctgcttggaagtcaagtggcccagattacggcggatcgcgtaccccagcctgggcc
gatggctctcgaactgcttacggagatggcaaccgcactgcgtatggcggaggttcaaga
acccctgcgtggcaatcaggcgcaaagacaccagcacatgacgcctttggccttggttcg
aagacgccggcgtacggaggcggagatgcctggggctctggatccaagacacctgcttat
ggctctgcgcctacacccggcgccagcggaggcgactcatggggctacacacccggcaac
tcttacgacgcaccgacgcccggtggcgctcttctgagtgcaccaacacccggagctctc
aatgcccctactcctggtgcctactcggcgcctacgccaggtgccgcaagtgccccaact
ccaggcggcggatggcaaggtgggtggggagcagactcggcgcccacaccggctgctggt
gctcccactcccgccgccagtggcttcaactcctcatcagcctactacggcgcgccgact
cccgcggcttatggcgcacccgagactccagcagccagcggaccgagatataccgacgat
gactag
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integrated database retrieval system
