KEGG   Colletotrichum fioriniae: CFIO01_09951
Entry
CFIO01_09951      CDS       T04796                                 
Name
(GenBank) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CFIO01_09951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfj03021]
    CFIO01_09951
   03019 Messenger RNA biogenesis [BR:cfj03019]
    CFIO01_09951
Transcription machinery [BR:cfj03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     CFIO01_09951
Messenger RNA biogenesis [BR:cfj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CFIO01_09951
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_RBM22 zf-CCCH_4 zf-CCCH_12 zf-CCCH_9 zf-CCCH_3 zf-CCCH_DUS3L
Other DBs
NCBI-ProteinID: EXF78940
UniProt: A0A010QQM7
LinkDB
AA seq 255 aa
MAAVAPRPETNHILTHAATATSFAFTPFLRQTYRHELSSDRPQCKPFLAGHCPLGAACPD
RHASSSSSNPTGGPSLVCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFMRNGYCSNGEE
CLYLHIDPQSKLPPCPHYDKGFCPLGPRCSKKHVRRKLCVYYLVGFCPEGPGCKYGAHPR
WRTDLEKPSAKVEGEEGEIKKDGEREEGEMFQQHRGERQRDMHDDRGHGGDRRHGGRGGR
WRGGGNKRYRGRGGH
NT seq 768 nt   +upstreamnt  +downstreamnt
atggcagccgtcgccccccggccagaaacaaaccacatcctcacccacgccgcgacagca
acctccttcgccttcacccccttcctccgccaaacctaccgccacgagctctcctcggac
cgcccgcaatgcaagcccttcctcgcgggccactgccctctcggcgccgcctgcccagac
cgccacgcctcctccagctcctcgaacccgacgggagggccgtccttggtctgcaagcac
tggctccgcggcctctgcaaaaagggcgagtcgtgcgagttcctgcacgagtacaacctc
cgcaagatgcctgagtgcaacttcttcatgcgcaacggctactgctccaacggcgaggag
tgcctgtacctgcacattgacccgcagtccaagctgccgccgtgtccgcactatgacaag
ggcttctgtccactgggtccgcggtgcagcaagaaacacgtgaggaggaagttatgtgtg
tattacctggtcgggttctgcccggagggccccggatgcaagtacggtgcgcacccgcgg
tggaggacggacctggagaagccgagtgccaaggttgagggcgaggaaggggagattaag
aaggatggggaaagggaggagggcgagatgtttcagcagcatcggggggagaggcagcgg
gatatgcatgatgatcgggggcatggtggagatcggagacatggtggtcgtggaggccgg
tggcgcggcggcgggaataagagataccgtggacgtggcggtcactga

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