Colletotrichum fioriniae: CFIO01_10223
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Entry
CFIO01_10223 CDS
T04796
Name
(GenBank) snf5/smarcb1/ini1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03082
ATP-dependent chromatin remodeling
cfj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CFIO01_10223
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CFIO01_10223
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfj01009
]
CFIO01_10223
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_10223
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_10223
Protein phosphatases and associated proteins [BR:
cfj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CFIO01_10223
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CFIO01_10223
SWI/SNF complex
CFIO01_10223
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CFIO01_10223
PBAF complex
CFIO01_10223
SWI/SNF complex
CFIO01_10223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INO80_Ies4
RMI1_N_N
Motif
Other DBs
NCBI-ProteinID:
EXF79763
UniProt:
A0A010S585
LinkDB
All DBs
AA seq
733 aa
AA seq
DB search
MAAPPSTSTPTAAGATASSSASTSASAAANDHDGTPRSAAAKALPVRDKDSFNKLQVERY
VTRDWHYSVAMKDAQERFEKDMQQTRDKIDDYNLIKAQRLYFPPSKLYGEGYRGYGNGYT
DIDPRMRAPFPAQVIYPSQKPRPGKRQSHPLRWKKRELKKQAEQHEELVPIRIDVDWEKI
KLRDTFTWNLHDRVIPGELFAQHLVEDLGIPLDAQHKPVLDQVTLQMRDQLNDFYPLVFS
EEDALDPELPYSAYKNDEMRILIKLNVTIGGVTLVDQFEWDINNPLNSPEEFAASMTRDM
SLSGEFTTAIAHCIREQCQLFTRSLYSVGHPFDGRPVEDPDLIAAFLPSPLPSVFRPQQQ
AKEYAPYLYELSDADLERNEVIFSREQRRQKRSINRRGGPQLPDLKERQRTIRTLLVSSV
LPGAAPNMEESTLYKRVAGAPPTTRKRPGARDGEVSDSDDSEDSGPDSPGVSQLGGTART
RGLRGAASAAQQRITNLGRSETPEASIVHHHETRRNLGRSLRDTRDETEEPTQLIVTLKV
GKDKLRRLLQNPRARFTPSGSQTPSTPAHTRIPSAAAAAASSMPPPSTPASNGQALPAQL
GTPLPQGQIGRQPAPPPVAGQPPPPAPPPPEWLKNCLQQLKQTYTFDNFEGMMKYSAINP
DTEMPISVPAGSQPPEGARWMFLPRIRCLDCPGKLYTPGPEMTAGNFEVHLRNKQHRQKV
DAREGRDTAPGTT
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccgccatccacgtctacgcctaccgcggctggcgcgacagcctcgtcctcg
gcatcaacctccgcgtccgccgccgccaacgatcacgatggcactcctcgctctgccgcc
gccaaggccctccccgtacgagacaaggattccttcaacaagttgcaggtcgagcgctac
gtgacacgcgactggcactactctgtcgcgatgaaggatgcccaggaacggttcgagaag
gacatgcaacagacgagagacaagattgatgactacaacctcatcaaagcccaacgcttg
tatttccctccgagcaaactatatggcgaaggatatcgtggctacggcaacggctacacc
gacatcgatccccgcatgcgagcgccctttcctgcacaagtcatctacccaagccagaag
ccccggccggggaaacgccagtcgcatccactcaggtggaaaaagagagagctgaagaag
caggcggagcaacacgaggagctcgttccgatacgcatagacgttgactgggaaaagata
aagcttcgcgacaccttcacatggaacctccacgacagggttattccgggcgagctcttt
gcgcagcacctcgttgaggatctgggcatccctctggacgcacagcacaaacccgtcttg
gatcaagtcacgttacaaatgcgcgaccagctcaacgacttctaccccctcgtcttctcc
gaagaagacgcgctcgacccggagctgccatattctgcctacaagaatgacgagatgagg
atattgatcaagctcaacgtcaccattggcggcgtgaccttggtcgatcagttcgagtgg
gatatcaacaatccactcaactccccagaggaatttgccgcctcaatgactcgcgacatg
tcgttgtccggcgagttcaccaccgcaattgctcactgcattcgggagcagtgccaactc
ttcactcggagtctgtacagcgtcggacatccctttgacggcagaccagtcgaagaccct
gatctcatcgccgccttcctgccgtctcctctaccatctgtattcagaccgcaacaacag
gccaaggagtatgcgccgtatctttacgagctcagtgacgccgatttggaacgcaatgag
gtcatcttctctcgggaacagagacggcagaagcgatctatcaaccgacgcggtggcccg
caactgcctgacctcaaggaacggcagcggacaatcaggacgctcctcgtctcgtccgtg
cttccaggtgctgcgcctaacatggaagagagcacgttgtacaagcgtgtggccggcgca
ccacccaccacccgcaagaggccaggagcacgcgatggcgaggtatccgattccgacgat
agtgaagactcaggaccggactcgccaggcgtgtctcagcttggcggcacggccaggacg
agaggccttcggggcgccgcgagtgctgctcagcaacgcatcacgaatctcggccgctcc
gaaacgcccgaagcgagcatcgttcatcaccatgagactcggagaaatcttggtcgctcc
cttcgcgacactcgcgacgagactgaggagcctacacaactcattgttacactgaaggtt
ggcaaggacaagctgaggagacttctccagaacccaagagcaaggttcaccccgagtggc
tcccagacaccgtcaacacccgcacacactcgcatacctagcgcggccgcggctgcagcc
agttccatgcctccgccgtccacgccggcctcgaatggtcaggctcttcccgctcaactt
ggcactcctctccctcaaggccaaattggtcgacaacctgctccgccccctgttgccggt
caaccgccaccacctgctcccccaccgccagaatggctaaagaactgtttgcagcagctg
aagcaaacatatacttttgacaacttcgagggcatgatgaagtactcagccatcaaccct
gacacagagatgccgatatcagtaccagcagggtcacagcctcccgaaggtgccagatgg
atgttcctgccccgtatccgctgtctcgactgccccggcaagctgtacacgcccggaccg
gaaatgacggcaggcaactttgaggttcacttgcgcaataagcagcatcgtcaaaaggtg
gatgctagagagggcagagacacagcacctggaacgacttaa
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integrated database retrieval system