Colletotrichum fioriniae: CFIO01_10267
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Entry
CFIO01_10267 CDS
T04796
Name
(GenBank) SNF2 super family protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFIO01_10267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_10267
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_10267
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
CFIO01_10267
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
CFIO01_10267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
EXF77562
UniProt:
A0A010QCF7
LinkDB
All DBs
AA seq
1155 aa
AA seq
DB search
MSSNKEDSGIVAEKTSEESAPSSTEADAPRTTAVQFEGDEAAFLRTITADIRDQDDLERD
ITTQANAALIEAEDKKDKQRIEKLEATKDKLEAKRVDQRKKLEGARRNPYQSRIIQKELD
KLDLEIENAINDISDCQARIDKRQEEIVVVDDPVKSKSKRLAGESHREYLVRTGKITPFA
NIGGERPDGFEGELADVLVEAEQDAAAEEYRSDDEEPKSHQVLRMPGFAEHPEAAPASAE
TEFSLRPRKKRKVDEGASSDEFDASAVSSAESQYASDTSGEEATGRKRKKGTTTDKKNKR
KKAAENTVTVGNTKVDLSSVDDGNEAIYQARLADWVRRRSAARQQQNGNADGDASTEENG
EEEWFKPSPDQPDHEFGNGLRLPGDIHASLFAYQKTGVHWLAELYEQGVGGIIGDEMGLG
KTVQAIAFVAALHYTKKLDKPVIVVVPATVMQQWVNEFHRWWPPLRVSILHSSGSGMVNV
AEDDDDEDYPGDRTNRDAAERIVRRVAKHGHVLVTTYAGLNTYGEQLLSLEWGYAILDEG
HRIRTPNANVTYQAKCLNTPHRLILSGTPIQNNLTELWSLFDFIFPMRLGTLVNFRQQFE
IPIKMGGHANATNLAVMTAEKCATTLKETISQYLLQRLKVDVASDLPEKTEQVLFCKLTP
EQNEEYVRFIHSDAVSQIMAKKRQSLYGIDILRKICNHPDLVSVNRKNQPGYDWGSPRRS
GKLQMVGDLLPMWKKFGHKTLLFSQTKIMLNIIQDYIGKMEGMNYLRMDGDVTIEKRQVL
IDKFNNDPSIDVFLLTTKVGGLGVNLTGATRIIIYDPDWNPSTDLQARERAWRLGQTKPV
AIYRLMTSGTIEEKIYHRQIFKQFMTNKVLKDPKQRANFDLSDLYDLFSFGDNSHSMASA
NRSKVFEGAEVKFNQSEGHNQLEKPSKNAVPISSVKAEDEVDTVRKLSGVAAMEEFTEPT
DDSEEKRITENLFSRTVDSAYEHDQIMNGKKKVQADQAMNRHEANKIAAQAAAHLRRAGE
AARRIPIGTVTWTGEIGEGGRPTAPRRRGVNSSAVMSSLADRQGLSQPASGSSSRGNTPS
TDKPLKEKDFILLIQTFMRRQGGKAVTKMLVDHFNPYCKTPKQTDDFKSALDRVAVLGKT
GGTGRGTWTLKPAFK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaacaaagaagatagtggcatagttgccgagaaaacaagtgaggaaagcgca
ccttccagcactgaagcagatgcacccagaaccacagcagttcagtttgagggcgacgag
gcggcatttttgcgaactatcacagccgatatccgggatcaagatgacttagagcgcgac
attacaacacaggccaacgccgccttaattgaggcagaagacaagaaggataagcagcgc
attgaaaagctggaagccaccaaagataaactcgaggcaaaaagagtagaccaacgaaag
aagctagaaggagctcgacggaacccttatcaatcacggatcatacagaaggagctcgac
aagctggacctagagattgagaatgctatcaacgacatctcggactgccaagctcgcatt
gataagaggcaagaagagattgtggtcgtggacgatcctgttaagagcaagtctaaacgc
ttggccggagagtcacacagagagtaccttgtccggaccggaaagatcacgccctttgcc
aatattggtggcgaacgacctgatggtttcgaaggagagctagcagatgttcttgtcgag
gctgagcaagacgcggctgcagaggaataccggagcgacgatgaagagccgaagtctcat
caagtattgcgcatgcccggctttgctgaacatccagaagcagctccggcatccgctgag
actgaattttctctacgaccgagaaaaaagcgcaaggtggatgaaggagcatcgtccgat
gaatttgatgcgtcggctgtcagttcggctgaaagccagtacgcttcggacactagtggg
gaagaagctacgggtcgcaagcgcaagaagggcacaactacggataagaagaataagcgt
aagaaggctgctgagaatacagtcaccgttggtaacacaaaagtcgacctgagcagtgtc
gacgacggaaatgaggcgatctatcaagcacgccttgccgattgggtcaggagacggagt
gcagctcgtcaacaacaaaatggcaatgctgatggcgacgcttcaactgaagagaatggc
gaggaagagtggttcaaaccttcgcctgatcagcctgatcacgaatttggtaacgggcta
aggctcccgggagacattcatgcgtcgctcttcgcgtatcaaaagactggtgttcattgg
cttgccgagctctacgagcaaggcgtaggtggcatcatcggagacgagatgggccttgga
aagacagtgcaagcaattgctttcgttgcggcgttgcactacaccaagaagcttgacaag
cccgtcatagtagtcgtccccgcgactgtcatgcagcagtgggttaatgaattccaccga
tggtggcctcctttaagagtgtcgattttgcactcgtctggtagcggcatggtcaatgtg
gctgaggatgatgacgatgaagattatcctggagataggacgaatcgtgacgccgcagag
cgtatcgtcaggcgcgttgccaagcatggacatgttctggtcaccacgtacgctggcttg
aacacctatggcgagcaactactgtccctggaatggggctacgccatcctcgacgagggg
cacagaattcgcactcccaacgcgaatgtcacatatcaagccaagtgtctcaacacacca
catcggctgatcctgtcgggtacaccaatccagaataatctcactgagctgtggtcgtta
tttgacttcattttccccatgcgactaggaactctggtcaactttagacaacagtttgag
attcctatcaagatgggcgggcacgcgaatgcgactaatcttgcagtcatgactgctgag
aaatgcgcgacgactttgaaggaaaccatcagccaatacctgcttcagcggcttaaggtt
gacgtggcgtcagacctgccggaaaagacggaacaggtgctgttctgcaagttaacgccg
gaacaaaatgaggagtacgttaggttcattcattcggatgcggtctctcagatcatggcc
aaaaagcgtcaatccctctacggaatcgatatcctgcggaagatctgcaaccatccggat
cttgttagtgtaaacaggaagaaccaaccaggatacgattggggaagccccagaagatct
ggcaagttacagatggtcggcgaccttcttccgatgtggaagaagtttgggcataaaacg
ctgctattctcccaaaccaagattatgctcaacatcatccaggactatatcggcaagatg
gagggaatgaactacctacgcatggatggagatgtcactatcgagaagagacaagttttg
atcgacaagttcaacaacgatccctctattgacgtgttcctgttgacgactaaggtcggc
ggcttaggtgtgaacctcaccggagcgaccaggatcatcatctacgaccctgactggaat
ccgtcaactgacttgcaagcgcgagagagagcctggcgactcggccagacaaagccagtc
gccatttaccggctaatgacttcgggtactatcgaggagaagatttaccaccgccagatc
ttcaagcaatttatgacgaacaaagtcctcaaagatccgaagcagcgggccaacttcgat
ctttctgacctttatgacctgttcagcttcggcgacaatagccatagtatggccagcgcc
aacagaagcaaggtctttgagggtgcggaagtcaagttcaaccagtcagagggccacaat
cagctggagaagccatcaaagaacgccgtacccatctcctccgtcaaggcagaagatgag
gtcgacacggtccgcaagctctccggcgtcgctgcgatggaggagttcacagagcctaca
gatgacagcgaggagaagcgcattaccgagaatctgttttctcgaactgtggatagcgcc
tacgagcatgaccaaatcatgaatggcaagaagaaggtgcaggctgatcaggctatgaat
cgacacgaggcgaacaagatagcggcccaggctgccgcccatctgcgacgagctggagag
gctgcgcgccgtatccccatcggaactgtcacctggactggcgagataggcgagggaggc
cgacctactgcaccgcgacgccgcggagtgaattcttcggcggtcatgtcttccctcgcg
gatcgtcaggggctcagtcagccggccagcggctccagttcacggggcaacactccaagt
acggacaagcccttgaaggagaaggatttcatactcttgatccagactttcatgagacgt
caaggtggcaaggcagtgactaaaatgctggtggatcatttcaatccgtattgcaagact
ccaaagcagacggacgacttcaagagtgccttggacagggtagccgtcctgggaaagacg
ggtggcacgggtaggggtacgtggacgctaaagcctgctttcaagtag
DBGET
integrated database retrieval system
