Colletotrichum fioriniae: CFIO01_10397
Help
Entry
CFIO01_10397 CDS
T04796
Name
(GenBank) MIF4G domain-containing protein
KO
K14327
regulator of nonsense transcripts 2
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03013
Nucleocytoplasmic transport
cfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CFIO01_10397
03015 mRNA surveillance pathway
CFIO01_10397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_10397
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CFIO01_10397
mRNA cycle factors
P-body specific factors
CFIO01_10397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
CBP4
CDC45
Astro_capsid_p
Motif
Other DBs
NCBI-ProteinID:
EXF74353
UniProt:
A0A010RQ75
LinkDB
All DBs
AA seq
1212 aa
AA seq
DB search
MPNTPPLTCFSYTDLFAVSKSLDSSLKKNTAFIKRLRTAVSAATLNTFLQEIRTLSLHKY
LSEIVSACFEGLCRLKSPGEIEAGVEIVSALHQRFGPSEFTEYLGWLLGKGMATPDKSLL
KSLAPEVREKEEKERLTRQRVLLRIVTELWLVDVLRTLDDVTRPDDATKGATGKVAELKP
RAQANRSGATEPFPLEVLKDLLGHDREHVNLPLLVIFVKAFSWDILGVKSSAAEGRKTVE
EDGATKTANGIMHGESGGEDQVTDTEDQPFTPPELQEKFKTILKKYFEDVKSHVIRDQKS
IHSQARRNAEAYVKSGEVFEDRQANFEKQMKAQERLVANAQAIADAIGADMPDLKENDDS
LANTNGSIGLVKAGDYLRGLGDGAGIWEDEDERRFYENLVDLKGKVPGILLDDGKKKKSD
NEEQVGRKVEVTDAPEPPKVPDAAEDQSTSIANKTIGAQVDAVLARLPDLTNKDIIDQAA
IDFCYLNSKASRNRLIKALTEVPKGRGDLLPSWARLAATLGRYMPDIPKGLVDYLDAEFR
SLQRRKDKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMNIEIICSLLE
NCGRYLLRNPETSPRMATFLETLQRKKSVQHIGQAERMLIENAVYYVDPPDRPAIQQKER
TPMELFIRKLIYMDMTKRNYSKVLKQIRRLHWEEAEVVTILEKVFSKPGKVKYGNIHLLA
ILLSAIYRYHPAFVVRVIDTVMESICFGLEQNDFKFYQRRISEVKYIGELYNYRMVEHPV
VFDTMYKIMTFGHGGPPILGRLNHFDLPDDFFRIRLIATILETCGMYFAKGAAGKKLDYF
LSFFQYYIYTKQSLPMDIEFIVQDTFALTRPQWKLATNLEEASKAFQLAIAQDQKVSGAD
KTLEADDASIGSSSDDEDGDEHLPEPEADEEESDSDEDAEENDVDMSHADSDSEDEAIVV
TRQQEQIDPEAEAEFEREYAKMMAESLESRKFERKPLFDVPLPVRGKSKESATAADSGDT
GVPAPSSTMAFSLLTKKGNRQQTRTVELPSDSTFAVAMKTQQQAEREEQQRIKNLVLNYD
LRESEDQDGNDYPKPLKAHPDIYKPQAGHEKPTSYHHNRTDRGKDRGGQRVRKLQLSDVD
WYESSTKRGNYFARAHTSHSDWDVEAGNDVEQSEIAPVQHHGTVHKRHMSAMHSTPRPGD
RKEQPRRVRKCQ
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacacccctcctctgacttgcttctcctacacagatctgtttgctgtcagcaaa
tctctcgattcatctctcaagaagaataccgccttcattaagcgcctccgaaccgctgta
tcagccgcgaccctaaataccttcctccaagagatccgcaccctcagcctgcacaagtac
ctctccgaaattgtctctgcctgcttcgagggtctatgcagactcaagtcccccggcgag
atcgaagccggcgtcgaaatcgtcagcgctctacaccagcgctttggtcccagcgagttc
accgaatacctaggatggctgcttgggaagggaatggcaacgcccgacaagagcttgctc
aagtcgttggcacccgaggttcgcgagaaggaagagaaagagcgcttgacgcgccagcgt
gtactcttgcgcattgtcaccgagctttggctggttgatgttctgcgaactctcgatgac
gttacaagaccagacgatgctaccaagggtgccacgggcaaggtcgctgagctgaagcct
agagcgcaggccaacaggagcggcgcgaccgagcctttccccctcgaggtactgaaggat
ctccttggccatgatcgggagcacgtaaacttgcctctactcgtcatcttcgtaaaggcc
ttcagctgggatatcttgggcgtcaagtcatcggctgccgagggacggaagacagtcgag
gaggacggtgcgaccaagactgccaacgggattatgcacggggagagcggcggcgaagac
caagttaccgacaccgaagatcagccgttcacgccccctgagcttcaggagaagttcaag
actatcctcaaaaagtactttgaggacgtcaagagccatgtcattcgagaccagaaatcg
atccattctcaagctcgccgcaatgctgaggcctacgtcaagtcgggcgaagtttttgaa
gatcgccaggccaactttgaaaagcagatgaaggcccaggagcggctggtagccaatgct
caggccatcgctgacgccattggcgctgatatgcctgatctcaaggaaaacgatgattcg
ctggccaacactaatggctcgatcggtctggtcaaggctggtgactatcttcgaggcctt
ggtgacggtgctggtatctgggaggacgaagatgagcgacgcttctacgaaaaccttgtc
gacctgaagggcaaagttccgggcatccttctggatgacggtaagaagaagaagtccgat
aatgaggagcaagtgggcaggaaagtggaagttaccgatgcaccggaaccgcccaaggtc
ccggacgcagccgaagaccagtccacctcaattgccaacaagacaatcggcgctcaggtg
gacgcagtactggctcgcctgccagacctcaccaacaaggacattattgaccaagccgct
atcgacttctgctacctcaactcgaaagcctcgcgcaacaggctgatcaaggctttgact
gaagtccccaaaggtcgcggcgacctgctgccatcatgggccaggctcgctgccaccttg
ggtagatacatgccggatattcccaaaggcctcgtcgactatcttgatgccgagtttcgt
agtctgcagagacgaaaggacaaagacttcctgggccaagtgcgcttgagcaatattcgc
taccttgctgagctgaccaaatttggcatcgtcccggagcatgttgtgtttcattgtctc
aaggtcagcctcgacgacttctcgaggatgaacattgagatcatctgcagtctcttagag
aactgcggacggtaccttttgcggaacccagagacttcaccacgcatggcaaccttcctc
gagacattgcagcgcaagaagtctgtccagcacattggtcaagccgaacgcatgctcatt
gagaacgccgtctactacgttgaccctcctgaccggccagccatccagcaaaaggagcgc
actcccatggagctgtttattcgcaagttgatctacatggatatgactaagcgtaattac
agtaaggtcttgaagcaaattcgcagactccactgggaggaggccgaggttgtcaccatt
cttgaaaaggttttctccaagccgggtaaagtcaagtatggcaatatccatcttctcgca
attctcctcagcgcaatttaccggtaccacccagctttcgtcgtcagggttatcgacact
gtcatggagtcgatctgcttcgggctggagcaaaacgacttcaagttctaccagcgaagg
atttccgaggtcaagtacattggcgaactctacaattaccgaatggttgaacatccagtc
gtcttcgacaccatgtataagatcatgacgtttggccatggtggtccacctattctcggg
cgactaaatcattttgatttgcccgatgatttcttccgcattcgtttgattgcgaccatc
ttggagacctgtggcatgtactttgccaagggtgcggctggcaagaaattggactacttt
ttgtctttcttccagtactacatctacaccaagcaatcgctgcccatggatatcgagttc
attgttcaagacactttcgcccttacacgacctcagtggaagttggcaactaacctcgaa
gaggcttcaaaggcattccagcttgccatagctcaggaccaaaaggtttcgggagccgac
aagacgctcgaggccgatgatgcatccatcgggtcatcttcggacgatgaggatggagat
gaacacttgcctgagcccgaagctgacgaagaagagtctgattctgacgaagatgccgag
gaaaatgacgtcgacatgtctcacgcggactctgatagcgaggatgaggccatcgtggtt
actcgtcaacaggaacagattgatccggaagccgaggccgagtttgaacgtgaatacgcc
aagatgatggccgagagcctggaatctcgcaagttcgagcgcaaacccttgttcgacgtg
ccgctgcccgtccgcggcaaaagtaaggagtcggcaacagcagctgactctggagatact
ggcgtccccgctcccagtagcacaatggccttttcgcttttgacgaagaagggcaaccgc
cagcaaacacgaaccgtggaacttccttcagactcgacatttgctgtggctatgaaaact
cagcaacaagccgaaagagaggagcagcaacgcatcaagaaccttgttttgaactatgat
cttcgcgagagcgaggatcaggatggtaacgactacccaaaaccactgaaagcacacccc
gatatttacaaaccccaagcaggccacgagaagccaacttcctatcaccacaatcgaaca
gatcgcggaaaagaccgcggcggacaacgggttcgcaaacttcagctaagtgacgttgac
tggtatgaatcatcaaccaagcgtggaaactattttgcgcgggcgcatacttctcactcc
gactgggacgtagaagctggcaacgatgtagagcagtcagagattgctccagtacaacat
cacggcactgttcacaagcgtcacatgtcggccatgcactctacgcccagaccaggagat
cgaaaggaacagcctcgccgggttcgcaagtgccagtag
DBGET
integrated database retrieval system
