Colletotrichum fioriniae: CFIO01_10470
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Entry
CFIO01_10470 CDS
T04796
Name
(GenBank) WD repeat domain-containing protein
KO
K12601
superkiller protein 8
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFIO01_10470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_10470
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CFIO01_10470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Ank_4
Ank
Ank_2
ANAPC4_WD40
Ank_3
Ank_5
WDR54
WD40_like
PQQ_2
eIF2A
Nbas_N
DUF5711
Lactonase
Nup160
MIOS_WD40
Motif
Other DBs
NCBI-ProteinID:
EXF81024
UniProt:
A0A010RSJ7
LinkDB
All DBs
AA seq
639 aa
AA seq
DB search
MTSPQLPRDNSKTTGLAGIPIPTELVLQIVKAIGPRPQPKPAEHLRLHGALEAGADSDSD
DLEIVDNFFYENPNKPTEADVLDGITDLKNLTISCRTLYQILRGVLYRRSGREDDWYALR
WASFNGNLRALEAAVEAGASVNYAFEKAGTPIDMLKYGRIDSTFGRNFPRLPRSKTYNFG
TPLLAAAYGDVTRRHEAIKWLLSHGADPNVTDANGIAPLHVVCRWGVRASVTVELLLKKG
ADANALGPRGWTPLHMTCYARRWHPDPEDPRRLSQQKQDLAMIPTAKELIKAGADLRART
TLGGAKESGEPYIGGLTPYELALYCQNVTMVEFFPHITDIFSLATTSRAVLSASGSSTLH
IHDTADPTIPITQSISGAHKLGCHHICTSRNGLVAASAGFAGEVKIWVINKDTSEWKLHS
EITNKAAKAGEVWAIALSEDGKFLAGTTYDGRVNVWDVGEEGTPKIREYETGSPGQGSFG
MSVDLSRDGRYTASGHQNGAVYVFNNDNGKLLFSLPGLVKSVRSVAFSPGNTRLAAAGDS
SVIALYDIKNGEQVSNMTGHSSWITSVDWNDTGEYLLSGAMDGKVKVWSVERSACVATHS
ETDKALWAVKWLPKTGKNESFCTAGANRSISFYREATGA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacctcagctgcctcgagacaactccaaaaccaccggtctggcaggtattcct
atcccaacggagctcgtcctacagatcgtcaaagccattggtccgcgaccgcagccaaag
ccggcagagcatctgagacttcacggtgctctcgaagctggggccgactccgactcagac
gacctggagatagtggacaacttcttttacgaaaaccccaataagccgacagaagcagac
gttcttgacggcatcaccgacctcaagaacttaactatctcgtgtaggacactataccaa
atcttgagaggtgtgctgtacagacgaagtgggcgagaggatgactggtatgctcttcga
tgggccagcttcaacggcaacctccgtgcgctggaagcagccgtcgaggccggcgcatca
gtcaactacgcttttgagaaggcgggaaccccgatagacatgctgaaatatggacgtata
gatagcacctttgggagaaacttccccagacttcccaggtcaaagacgtacaactttggc
acacccttgcttgccgctgcgtatggcgacgtcacccggcgacatgaggcaatcaagtgg
ttgctctcccacggcgccgatccaaatgtcacggacgccaacggcatcgcgccgctgcat
gtcgtgtgcagatggggcgtacgagcgagcgtgaccgtcgagctcctcctcaagaaaggc
gcggacgccaatgccctcggccctcgggggtggacgcctctgcacatgacgtgctacgcg
cgcagatggcatcctgatccggaggaccctcggcgtctgtcgcagcagaagcaagacctg
gccatgatacctactgcaaaggagctgatcaaagcaggggctgacttgcgggccaggacg
accttgggcggagcgaaggaatctggcgagccctacatcggtggcctgacgccgtatgag
ttggctctttactgtcagaacgttacaatggttgagttcttcccccacataaccgacatt
ttcagtctggccactacctcaagggctgtattgtctgcgagcggctcatcgaccctccac
atccacgacaccgccgaccccacgatccccatcacgcagtccatcagcggtgcacacaag
ctgggctgccaccacatctgcacctcccgcaatggtctggtagccgcgagtgcaggcttc
gccggcgaggtgaagatctgggtcatcaacaaggacacgagcgagtggaagctccactcg
gagatcacgaacaaggcggccaaggccggtgaggtctgggccattgcgctcagcgaggat
ggaaagttcctcgcgggtacgacctacgacggccgggtgaatgtgtgggatgttggcgaa
gagggcacgcccaagattagagagtacgagacgggaagtcccggccaggggagctttggc
atgtcggtcgacttgagccgtgatggacggtatactgccagtggccaccagaacggagct
gtctacgtcttcaacaacgacaacggaaagttgttgttctcactaccaggcctggtcaaa
tctgtccgctctgtcgcattctctcctggaaacaccagactagctgctgctggcgactca
tccgtcattgctctctacgacatcaagaatggcgagcaagtcagcaacatgactggccac
tcttcatggatcacatctgttgactggaacgacacgggtgaatacttgcttagcggagcg
atggacggaaaggtcaaggtctggtcagttgagcgtagtgcctgtgtcgcgacacacagc
gagacagacaaggcgctgtgggctgtcaagtggctcccgaagactggaaagaacgagtct
ttctgtacggcgggcgccaacaggagcatttcattctatagagaggctactggtgcataa
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