KEGG   Colletotrichum fioriniae: CFIO01_10748
Entry
CFIO01_10748      CDS       T04796                                 
Name
(GenBank) LSM domain-containing protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03018  RNA degradation
cfj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CFIO01_10748
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFIO01_10748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfj03019]
    CFIO01_10748
   03041 Spliceosome [BR:cfj03041]
    CFIO01_10748
Messenger RNA biogenesis [BR:cfj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CFIO01_10748
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CFIO01_10748
Spliceosome [BR:cfj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CFIO01_10748
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-ProteinID: EXF83254
UniProt: A0A010RYC7
LinkDB
AA seq 99 aa
MATLGGYLNKKVLIVTSDSRILVGTLEAADQSTNLVLSNAQERVIQTPESGEPSVEVPLG
LYLVRGDNVCTIGLVDEALDDSINWTEVKGSAIGGTKHV
NT seq 300 nt   +upstreamnt  +downstreamnt
atggcaaccctcggaggctacctcaacaagaaagtcctcattgtgacgtcggactcacgg
atcttggtgggcacattggaagctgcggaccagtccacgaacctcgttctcagcaatgcc
caagagcgagtcatccaaacccccgagagcggcgaaccctctgtcgaagtgcctctcggc
ctctatcttgttcgaggcgacaacgtctgcacaatcggcttggtagatgaggcactagac
gatagcatcaactggaccgaagtcaagggttctgctattggaggaaccaagcacgtatga

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