Colletotrichum fioriniae: CFIO01_10748
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Entry
CFIO01_10748 CDS
T04796
Name
(GenBank) LSM domain-containing protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03018
RNA degradation
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_10748
09123 Folding, sorting and degradation
03018 RNA degradation
CFIO01_10748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_10748
03041 Spliceosome [BR:
cfj03041
]
CFIO01_10748
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CFIO01_10748
mRNA degradation factors
5'-3' decay
Lsm complex
CFIO01_10748
Spliceosome [BR:
cfj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CFIO01_10748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-ProteinID:
EXF83254
UniProt:
A0A010RYC7
LinkDB
All DBs
AA seq
99 aa
AA seq
DB search
MATLGGYLNKKVLIVTSDSRILVGTLEAADQSTNLVLSNAQERVIQTPESGEPSVEVPLG
LYLVRGDNVCTIGLVDEALDDSINWTEVKGSAIGGTKHV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctcggaggctacctcaacaagaaagtcctcattgtgacgtcggactcacgg
atcttggtgggcacattggaagctgcggaccagtccacgaacctcgttctcagcaatgcc
caagagcgagtcatccaaacccccgagagcggcgaaccctctgtcgaagtgcctctcggc
ctctatcttgttcgaggcgacaacgtctgcacaatcggcttggtagatgaggcactagac
gatagcatcaactggaccgaagtcaagggttctgctattggaggaaccaagcacgtatga
DBGET
integrated database retrieval system