Colletotrichum fioriniae: CFIO01_10810
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Entry
CFIO01_10810 CDS
T04796
Name
(GenBank) TFIIH p62 subunit domain-containing protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03022
Basal transcription factors
cfj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CFIO01_10810
09124 Replication and repair
03420 Nucleotide excision repair
CFIO01_10810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_10810
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_10810
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CFIO01_10810
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CFIO01_10810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-ProteinID:
EXF84744
UniProt:
A0A010S298
LinkDB
All DBs
AA seq
664 aa
AA seq
DB search
MAIPSGRTAFKKKDGVLTLTPDQQSVIWTPAPGNGPPTVSLVIANISNLQQTPDSAAKVM
LKIFEKPPDATEQVPYLFHFTSPEARSEANAIKDLLSRLLADIRSGDPNVPKPSGNSTPN
AANGANGASGGGAGAGGGSSMAFASSANAKPNSARWFDDAQLKGDIELQQSLMKKDRTLH
QTYMDARATKPESISDAAFNAQFWSTRTNLLRAHAIEVNQQKGAYNVLPAIKPRLENDVL
KLDITVEMVQLIMAQHPLVKRLYDENVPKVPESEFWSRFFLSKLFRTLKGDRITDERKEG
IKRDALFDAHDASENTTMFQRKSMAQSVPHIIDVHGNEENQGGFRSGNQKDVEMRPRKNV
PIVNTLNSLSERMLANVAPSDRDGGVEAEEDSTWAEIALRDLRGDAKENKIILNIKEQNR
FFAKKDEAKSANALAFAKQNPSDVLFDIQTDLETIETDGAGGLNLRAGIGIVDDSDSDDD
AAGGGGGTRRPPHVGSRAARKAAGDDIMKGIRQRRAQKYGDTAADESRPMGLPVEVAERC
QLTHATTVEFLHQFWNAFLSGDPDRANELQYLVESLKRSAERIHAVADEAEKTRDDIIRA
KKKEIMDHYKATGKKIRGWRPEHEKGGRKAVLAIMQPTLEALKRAQGDYQRALAAEGVQL
STEA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcgataccgtcaggtcgtacggccttcaagaagaaggatggtgtcttgaccttgacg
ccggatcagcagtccgtcatttggactccagcacccgggaatggcccgcctacggtctcc
ctggtgattgccaatatctcaaacttgcaacaaacaccagacagcgcagccaaggtcatg
ctcaagatctttgagaagcctccagatgcaacagaacaagtgccgtacctcttccacttc
acatcaccagaagccaggtccgaggccaacgccatcaaggacctgctctcgaggctgttg
gccgatatccgctccggcgatcccaacgtccccaaaccctccggcaactcaaccccgaac
gcggccaacggcgcaaatggtgccagtggtggtggcgctggcgccggcggcggctcgtcc
atggcgtttgccagctccgccaacgcgaagcccaacagcgcgcgctggttcgacgacgcc
cagctcaagggcgatattgagctgcagcagtcccttatgaagaaggaccgcactctgcac
cagacgtacatggatgcgcgcgcgaccaagcccgagtcgatatcggacgcggccttcaac
gcgcagttctggtcgacgcgcacaaacttgctgcgtgcccacgccatcgaggtgaaccag
caaaagggcgcgtacaatgtcctccccgcgataaagccacggctggagaacgacgtgctg
aagctcgacatcaccgtcgagatggttcagctcatcatggcgcagcacccgctcgtcaag
cggctctacgacgaaaacgtgcccaaggtccccgagagcgagttctggtcccgcttcttt
ctcagcaagcttttccgcacgctgaagggagacaggatcacggacgagagaaaggaggga
atcaagcgcgacgcgctcttcgacgcccacgacgccagcgagaacacgacaatgttccag
cgcaagagcatggcgcagagcgtgccgcacatcattgacgtccacggcaatgaggagaac
cagggcggcttccgcagcggaaaccaaaaggacgtcgagatgcggccgcgcaagaacgtg
cccattgtcaacaccctcaacagtctcagcgagcgtatgctcgccaacgtggccccctca
gatcgcgatggcggcgtcgaggccgaagaggactcaacgtgggcggagattgccctccgc
gacctgcgcggcgacgcaaaggagaacaagatcatactcaacatcaaggagcagaaccgt
ttctttgcgaaaaaggacgaggcaaagtccgcaaacgccctcgcctttgcaaagcagaac
ccctcggacgtcctctttgacatccagaccgacctcgagacgattgagacggatggtgcg
ggcggcctcaacctccgcgcgggcatcggcatcgtcgacgacagcgacagtgacgacgac
gccgccggaggaggaggaggaacgcggcgcccgccccacgtcggctcccgcgccgcgcgc
aaagccgcgggcgacgacatcatgaagggcatccggcagcgccgcgcgcaaaagtacggc
gacacggcggcggacgagtcccgccccatgggcctgcccgtcgaggtcgcggagcggtgc
cagctgacgcacgccacgacggtcgagttcctgcaccagttctggaacgccttcttgtcg
ggcgacccggaccgcgccaacgagctgcagtacctcgtcgagtccctcaagcgctcggcc
gagcgcatccacgccgtcgccgacgaggcggagaagacgcgcgacgacatcatccgggcc
aagaagaaggagattatggatcactacaaggcgacggggaagaagattcgcgggtggcgg
cccgagcacgaaaagggcgggaggaaggccgtgttggcgattatgcagcccacgctcgag
gcgttgaagagggcgcagggggattatcagcgggctcttgctgctgaaggggttcagctt
tctactgaggcttga
DBGET
integrated database retrieval system
