Colletotrichum fioriniae: CFIO01_10820
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Entry
CFIO01_10820 CDS
T04796
Name
(GenBank) hypothetical protein
KO
K15218
RNA polymerase I-specific transcription initiation factor RRN6
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_10820
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
CFIO01_10820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn6_beta-prop
Rrn6_HB
Rrn6_K-rich
Motif
Other DBs
NCBI-ProteinID:
EXF84754
UniProt:
A0A010S2B1
LinkDB
All DBs
AA seq
1095 aa
AA seq
DB search
MSRVPGQAQALRIIQAPETLYPASLSTELAPSSTIWDSQRVQRRWLFNAHPEAFAGSSEA
ASFLYDGLAHLMRADAAPTTQPLMTISQMADVTNHTRVVPVPVLATAAGESGELLRLSKI
DETNWQWGENESPTLRMLSIDQHDKEESVLWSSDGAPILQIKPALSLVRFEPTRWLLVQK
RTSTTILQPDYHKIPVSERPSGIDQAIERPSRINPRPVLTISSEQTGGFAHSDVSFSYGS
QKKPPQLAIIDECGYYSVWDVKGRDMVGSSGLRPKLRHCAHIHLGVTEQLPDEDSPAFRA
EPHGVMWIGAAGPGVDLWDVPEGQDVDAGNDLAALTSRSKKLVIWNRAKFEVVDIKDSTF
RKSLVILKTDEPDYILDVKPNPLNRSQIFILTSSGFFWIETSSSGTTANKAGGLSILQSF
AHLRGSDADALRLTVHHGGSEAGNEKCTVFIYSDRSPEVDVYWFYAPEDTGLPQFEHHIM
KLTGDATKLQTLCPVPAFLRNPSPASAKGPGLEYLNHEIRFQQLFVLGRDLSLSQSLFAI
SAGPDLDVVAPDSSREWSRDGRRQAHNKRRRQFLQHFEGTFVVPDGLGDMDELVQRRANR
YQELMESEQAGEEAQLKQRWPRGLNLDQFVSRVNVSIESVIMASEQATIEGPLSVFEAIR
EAAVNCLETEGGYIPLHTLHEYENTFEAPPVSHEAVAAWDSRFQEMMNAQTDRVIAQPLT
TQFLHGLETLSPLADIRDQLEEMWSAVGLPPRAQQSRNVVLAETAEAIARSLFGVAVLDA
NLPSREDESPTWVPEPPPLPVRQPSQRSSQRFSSSPAKRSQLSSSQRLSLSPTKLSQPLS
QRISLSPTKRGQALGHRLSFSPSKGARSQQRFDIPPSSFPFPSGPLFSQSSSAAAPSSSF
PDAAPPTPTTPAPTTIATTALQRLSMLAEDINTAEAPARQHKVLAYWPTARGVSTEGYVS
SVLASSTKHMDVLNERRHRAESRRRKRRSQFLGASSQHGWGTSEMDDVFESSGPGFGPAT
KTATNTGSEFAPALPPATQPLPKLAPPIIGSSQLPPVPSSQAIFSSQMPLVMSQPMAGRH
GMRSPGKKKKRKSGF
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggtgccaggccaagctcaagctcttcggatcatccaggctcctgagaccctc
tatcctgcctctctctctacggaactggcaccttcatcaacaatttgggattcacagcga
gtgcagagacgatggctgttcaacgctcacccagaggctttcgcgggcagctccgaagcc
gccagctttctgtacgacggactcgctcacctcatgcgcgccgatgccgcgccgacgact
cagccgcttatgaccatcagccagatggcagatgtcaccaaccacacacgggttgtgccc
gtccccgtactggccacggctgccggcgagtcgggtgagctcctccgtctgtccaagatt
gatgagacaaactggcagtggggtgagaacgagagcccaacgcttcgcatgttgagcatc
gaccagcatgacaaggaagaatctgtcttgtggtcgagcgatggggccccgattctgcag
atcaagcctgcgctgagcttggtccggttcgagcccacgagatggctgctggtgcagaaa
cggacttcgactaccatcctccagccggattaccacaagatccctgtttcagaacgccca
tctgggattgaccaggctatcgaacgcccatctcgaattaacccgagacccgtcctcacc
atctcctcggagcagactggaggttttgcgcattctgatgtgtctttcagctatggctcg
cagaaaaagccgcctcagctggccattatagatgagtgcggctactacagtgtctgggat
gtcaagggtcgagacatggtgggatccagcggcttgcgtccaaagctccgccattgcgcc
cacattcacttgggtgtcacggagcagctccccgacgaggactcgccggctttccgcgca
gagcctcatggtgtcatgtggatcggcgcggccggcccaggtgttgatctttgggacgtg
cccgaagggcaagatgtcgatgcaggaaacgacctagccgccctgacgtcgaggtccaaa
aaactcgtcatctggaaccgcgcaaaattcgaggtcgttgatatcaaagactcgacgttc
cgaaagagcttggtcatactcaagacggacgagccagactacatactcgacgtgaagcca
aaccctttgaacaggagtcagatcttcatcctcacgagctcggggttcttttggatcgag
acgtcgtcttcagggacaacagccaacaaggcaggcggactctccattctacaatccttt
gcacatctcaggggctcggatgccgacgctctcaggctcaccgtgcatcatggcggttcg
gaggcaggaaatgagaagtgcacggtttttatctactctgacagatcaccagaggtagat
gtctactggttctacgcgcctgaagacacgggattgccacagtttgagcaccatatcatg
aagctcacgggcgacgcgacgaagcttcagactctgtgtccggtgccagctttcctgaga
aacccctctcctgcatcagccaagggcccaggcttggagtacctcaaccatgagattaga
tttcagcagttgttcgttcttggcagggacctcagcttgagccagagcctgtttgcaatc
tcagccggccctgacctcgatgtggtggcccccgatagcagtcgcgagtggtcaagggat
ggacgcagacaggcgcacaacaagaggcgaagacagttcctgcagcattttgaaggcact
tttgtcgttcccgatggcctgggtgatatggatgagctggtgcagcgccgcgccaatcgg
tatcaggagctcatggagagtgagcaggcaggagaggaagcacaacttaaacagcggtgg
cctaggggtctgaacctggaccagttcgtatctcgcgtcaatgtttcgatcgagtcggtc
atcatggcgtcagagcaagctaccattgaggggcctctgtctgtgttcgaggccatacgg
gaagcagccgtcaactgtctcgagactgagggcgggtacatcccgctgcatactttgcac
gagtacgaaaatacctttgaggcgccccctgtatcccacgaggcagtagcagcgtgggac
tctcgcttccaggagatgatgaacgcgcagaccgatcgcgtcattgctcaacctctcaca
acgcaatttctacacggcttggaaacattgtcgcccctcgcagacattcgtgaccagctc
gaggagatgtggagtgcagtgggcctcccgcctagagcacagcaatcacgtaacgttgtg
ctggcagagacggccgaagccatcgccaggtccctcttcggtgtggccgtactcgacgcg
aacctcccaagcagagaagacgagtcccctacctgggttcccgagcctccaccactgcca
gtccggcagccgagtcaacggtcaagccagcgcttctcgtcatcgcccgcaaaacgtagc
caactatcgtcaagccagcgactctcgctctccccgaccaaattaagccagcccctcagc
cagagaatctctctatcgccaaccaaacgcggccaagccctcggccaccgcctatcgttc
tcgccttccaaaggtgcccgctcccaacaacgcttcgatatacccccttcatcgttcccc
tttccctcagggcccctattctcccagtcctcctccgccgccgccccctcctcgagcttc
ccagacgccgcaccaccaacaccaacaacacccgcacccaccacaatcgcaaccacggcc
ctccagcgcctaagcatgctcgccgaagacattaacaccgcggaagcccccgcccgccaa
cacaaagtcctcgcctactggcccaccgcccgcggcgtcagcacggaaggctacgtctcc
tccgtcctcgcctcctccacaaaacacatggacgttctcaacgagcgccgccaccgcgcc
gaatcccgtcgccgcaagcgcaggtcacaattcctcggcgcgtcgtcgcagcacgggtgg
ggtacgagcgagatggacgacgttttcgagtcatctgggcccgggttcgggccggcgacg
aagacggcgacgaacaccgggtcggagtttgcgcctgcgctaccgccggcaacgcagcct
cttcccaagctcgcgccgcccatcatcggctcgagccagcttccgcccgtgccgtcttcg
caggctatcttctcgtcgcagatgccgctcgtcatgtcgcagcccatggctgggaggcac
ggtatgcggtcgccggggaagaagaagaagagaaagtctgggttttaa
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integrated database retrieval system