Colletotrichum fioriniae: CFIO01_11096
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Entry
CFIO01_11096 CDS
T04796
Name
(GenBank) SNF2 super family protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_11096
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_11096
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CFIO01_11096
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CFIO01_11096
SLIK complex
CFIO01_11096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
Cdh1_DBD_1
DEAD
CDH1_2_SANT_HL1
AAA_22
DHR-2_Lobe_C
Motif
Other DBs
NCBI-ProteinID:
EXF79687
UniProt:
A0A010QIA1
LinkDB
All DBs
AA seq
1599 aa
AA seq
DB search
MSSPLEPGPTDGYGSPEGGSPSPIVAAGHQSDSDLSDMHDNAARLASSSPSPDPNDLSGY
MNGAPDFAESESSGDENNASDDADFDMDEDAASVAQSDGAGDVHSDSNDSQRPTKRKAPA
REDDYIKANPELYGLRRSSRPTQQRRMVDSSDESESDVVPTNRRVVKRRRVETSRQSSKR
GTPARQPSTNSDSDSDNYGGARAKSLQKKARRQREAQPSALLAEKRWSSRRAAQVQQGAY
EESDVDDEDEDMLTPNYYAADVVDDSPYIDKVLRHKLKEGLELSWSSTRTDFEYFVKWQG
KSHLHDTWETAETLRSMRGYRRVENYFRTIVEHELLIRYGEDIPPETKEQFFLDRERAEE
ALEDFTKVDRVVAVRDGEEETEYLVKWKGCYYDECTWEVASAISADFQEKIDQFLDRSSR
SWVSDRKESNPDTRTRMTKLESQPDFIKNGELRSFQLRGLNFLCLNWTRANNVILADEMG
LGKTVQSVSFLSWLRNEREQEGPFLIVAPLSVIPAWGDTFDNWSPDMNYVVYLGNEASRS
TIRDNELMINGNPKKPKFNALITSYEMILQDWQFLQQIKWQALLVDEAHRLKNKESQLYA
RLVSFGVPCKILITGTPIQNNLAELSALMDFLNPGKVVIDEELEDLAGNDTQEKLQDLHK
SIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLDYYKNILTRNYAALSSATGQKNSLL
NIMMELKKVSNHPYMFAGAEERVLAGSIRREDQIKGLIASSGKMMLLDQLLTKLKKDGHR
VLVFSQMVKMLDILSDYMALRGYKFQRLDGTIAAGPRRMAINHFNAEDSDDFCFLLSTRA
GGLGINLMTADTVVIFDSDWNPQADLQAMGRAHRIGQKKPVSIYRLVSKETVEEEVLERA
RNKLLLEYLTIQAGVTDDGKAFRDEMNKKGLKIDGPNSAEDIQLILKMRSQKMFEQSGNQ
ERLEQLDIDSILENAEITKTKVDDKMNLSSGGIDWDNFMQYTDVKVDDLALDWDQIIPAE
ELAVIKADEEQRKNEEYVAKVAAESAPRRATMKNRNETDRSDRLAKKRQREEQQRREAEE
QRALLSDPKRPLNEKETRNLLKAFFRYGSMDDRGEEIVQEARLGERDRDFLKSILDDFVK
RCEDALNDNNTRLMDDERKLGKSLTKKDKKAVLVDFGEVRKMNAETAVERPQQLRLLRQT
IRKSDDFKTFRLADATKAAHYSCEWGAREDGMLLVGIDKYGFGAWTQIRDDATLDMSDKF
FLEEHRIEKKEERNKATEKGVNSPGAVHLVRRSEYLLSVLAAKHSSDPLAHRTVENHHRN
NKRLANGHRRSDVGSGAASPAPPALKKSGSHRDRERSHADHHRSRSNADEKGTPRPDSKR
KHSGHDEGRIPKHRRTDEARRTKSNGDEQQSPRADRPRHRDEGERSSKHRRADDHRHGDD
RRRSSNTPRANQPDNERRNQALHRLDQLRKMGDNKEEREKDADAMLWYLLKPVRANFEAI
LVTTKERIKSSKERAKIFGEELVVIGNFLDREFVQERDNALKNRFWEFLANLWPVDSTSN
EVTGDRLSAMYRVLRDREVKKHNGDKPAAAAANGTAAAS
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccccctcgaacccggtcccaccgacgggtatgggtcgccggagggcggttct
ccctccccaatagtcgctgccggccaccagagcgacagtgacctctcagatatgcacgat
aatgccgcacgcctcgcctcatcgtcaccgtcgccggatcccaacgacttgtccggttac
atgaatggcgcacccgactttgccgaaagcgagagctccggcgatgagaacaatgcatct
gacgatgccgacttcgatatggacgaggacgcggcttctgttgcccaaagcgacggggct
ggcgacgtccattcggactccaacgattctcaacggcctacgaagcggaaagctcctgcc
cgagaggatgattacatcaaggcaaatccagaactctacgggttgagaagaagttcccgc
ccgacgcagcagcgcagaatggtcgattcatctgatgaatccgaatctgatgtagtgcct
actaatcgaagagtggtgaagagaagacgcgttgagacatcgagacaatcttcaaaacga
ggtacacctgcacgacaaccctccacgaattcggactccgactctgataactacggtggt
gcacgcgcgaaaagtctgcaaaagaaggcacgccgtcagcgtgaagcccagccaagcgcg
cttctcgcggagaagcgttggtcgagcagacgggccgcgcaagtgcaacaaggcgcctat
gaagaaagtgatgtcgatgacgaggacgaggacatgcttacgcccaattactatgcggca
gatgttgtagacgactccccttacattgacaaggtccttcgacacaagctgaaagaaggc
cttgagctcagttggagctcgaccagaaccgacttcgaatacttcgtcaagtggcaaggc
aagtctcacttgcacgacacttgggaaacagcagagaccctacgcagtatgcgaggctat
cgtagagtcgagaactacttcagaaccattgtggagcacgagcttctgattcgatatggt
gaagacatcccgcccgaaaccaaggagcagttcttcctcgatcgtgagcgtgcggaagaa
gccctggaagatttcacgaaggtggacagagttgtcgctgttcgcgacggtgaggaagag
acagaataccttgtcaagtggaaaggctgctactacgacgagtgcacatgggaagttgcg
tccgccatcagtgcagacttccaggagaagattgatcaattcttggaccgatcttctcgt
tcgtgggtctctgatcgcaaggagtcaaacccggatacccgaacaaggatgaccaagctt
gaatcgcaacccgacttcatcaaaaatggtgaactgcgctcattccaactcagaggcctg
aactttttgtgtctcaactggactcgcgccaacaacgtcattcttgctgatgaaatgggc
cttggaaaaaccgttcagagcgtatcattcctcagctggcttcgcaacgaacgcgagcaa
gaggggcctttcctcattgttgcccctttgagtgtcattccggcatggggtgataccttc
gacaactggtcccccgacatgaattacgttgtgtatctcggcaacgaagcctcccgcagt
acaattcgtgacaacgagctaatgatcaacggcaaccccaagaagccaaagttcaacgcc
ctcatcacttcgtatgagatgattcttcaagattggcaatttcttcagcagatcaagtgg
caagctcttcttgtggacgaggctcatcgtttgaagaacaaggaatcccaactgtacgcg
agactggtgagcttcggcgtgccttgcaagatcttgattacgggtacccctattcagaac
aacctagccgagctgtccgcattgatggacttcctcaaccctggcaaggttgtcattgac
gaagaattggaagaccttgcaggtaacgatacgcaagaaaagctccaggacctccacaag
tctatcgccccttacattttgcgacgcacaaaagagacagtcgagtcagaccttccgcca
aagacggaaaagattattcgtgttgagctctcggacgtgcaactggattattacaagaac
attcttacaaggaattatgccgcgttgtccagcgcaaccggccaaaagaactccttgttg
aacatcatgatggagctgaagaaagtcagcaatcacccatacatgttcgcgggtgccgaa
gagagagttctcgccggcagtatccgtcgagaagaccagatcaagggtctcattgccagc
agtggaaaaatgatgcttctcgaccagctcttgacaaagctgaaaaaggatggacacaga
gtactcgtcttcagtcaaatggtcaagatgctcgacattctcagcgattacatggcactt
cgaggctacaagtttcagcgtctcgacggcaccatcgccgctggcccccgacgcatggct
atcaaccacttcaatgcggaagatagcgacgacttttgcttcctcctctccaccagagca
ggtggtttgggtatcaacttgatgacagccgacactgtggtcattttcgactccgactgg
aatccccaggctgatttgcaggctatgggacgtgcgcaccgtatcggtcagaagaagccc
gtcagcatctaccgcttggtgtcaaaggagactgttgaagaagaagtgctcgagcgcgct
cgcaataagctcttgctcgagtacctgactattcaagctggcgtaactgacgatggcaag
gctttccgtgatgaaatgaacaagaagggtctgaagattgacgggcccaactccgctgaa
gacatccagctcattctcaagatgcgctcgcagaagatgtttgagcaaagcggcaatcaa
gagcgtcttgaacagcttgacattgattccatattggagaatgccgaaatcacgaagacg
aaggtggatgacaagatgaatctcagtagtggtggtattgactgggacaatttcatgcaa
tacaccgacgtgaaggtggacgacttggcccttgactgggatcaaattatccccgcagag
gagcttgccgtcatcaaggctgatgaagagcaacggaagaacgaggagtatgtggcgaag
gtagctgccgagagcgctcctcgtagagcgacaatgaagaatcgaaatgagacggacagg
tccgaccgccttgcgaagaaacggcaaagggaggaacaacaacgccgagaagccgaggag
cagcgtgccctgctgtccgaccccaagcgcccactcaacgagaaggagacgcgaaacctt
ctcaaggctttcttcagatacggatctatggacgaccgcggcgaggaaatcgtgcaagaa
gcacgcctcggagagcgcgaccgcgatttcctcaagtctatactagacgatttcgtcaag
agatgcgaagatgcgctcaatgataataacacacgtctaatggacgacgagcggaaactt
ggcaagtccctgacgaagaaggataagaaggctgttctggttgattttggcgaggtcagg
aagatgaacgctgagactgcggtcgaacgccctcaacaacttcgcctgctgaggcaaacc
attcggaagagcgatgacttcaagaccttccgtctcgccgatgcgaccaaggctgcccac
tattcatgtgaatggggcgctcgagaagatggcatgcttctggttggcatcgacaagtac
gggtttggggcttggactcaaatccgggacgatgccacgctagacatgtcggacaaattc
ttcctggaagagcaccgcatcgaaaagaaggaagaacgaaataaggcgactgaaaagggt
gtcaactcgccaggcgccgtccatctcgttcgtcgttcagaatacctgctttctgtgctt
gcggccaaacattctagtgacccattggctcacagaactgtcgaaaatcaccatcgcaat
aacaagcgattggcgaatggacaccgtcgtagcgacgtaggcagtggcgcggcgtctcct
gctccgccggccctcaaaaagagcggctcgcatcgggacagagaacgcagccacgctgat
catcatcgcagccgcagcaacgctgatgagaaaggcacgccgcgaccagactccaaaagg
aagcattcaggccacgacgaaggccgtattccgaagcatcggagaacggacgaagcccga
cggaccaaaagtaatggggatgagcaacagtctcctcgagctgacagaccaaggcatcgt
gatgagggtgaacgaagtagcaaacatcgtcgtgcagatgaccatcggcatggcgatgac
cgacgcaggtcaagtaacacaccgcgagcaaatcagccggacaacgagcgtcgcaaccaa
gcccttcaccgacttgatcaactccgtaagatgggcgataataaagaggaacgtgagaag
gacgcggatgccatgttatggtacttgctcaaaccggttcgagcaaattttgaggcaatt
cttgtcacgacaaaggagaggatcaagtctagcaaggaacgcgccaagatatttggagag
gagttggttgtcattggcaacttcctagatcgcgaattcgttcaggagcgagacaatgcg
ctcaagaatcgcttttgggagttcttggcgaacctgtggccagttgacagcacgagcaac
gaagtaacgggcgatcggctgagcgccatgtacagagtcctgcgggacagagaagtgaag
aagcacaacggagacaaaccggccgccgcggcggcaaatggcactgcagcagcttcttag
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