Colletotrichum fioriniae: CFIO01_11472 Help Entry CFIO01_11472      CDS       T04796                                  Name (GenBank) pre-mRNA-splicing factor rse-1   KO K12830   splicing factor 3B subunit 3 Organism cfj  Colletotrichum fioriniae Pathway cfj03040   Spliceosome Brite KEGG Orthology (KO) [BR:cfj00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CFIO01_11472  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cfj03021]     CFIO01_11472    03041 Spliceosome [BR:cfj03041]     CFIO01_11472    03036 Chromosome and associated proteins [BR:cfj03036]     CFIO01_11472 Transcription machinery [BR:cfj03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      CFIO01_11472 Spliceosome [BR:cfj03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     CFIO01_11472  Complex B     CFIO01_11472  Complex C    U2 SnRNP specific factors     CFIO01_11472 Chromosome and associated proteins [BR:cfj03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      CFIO01_11472     TFTC complex      CFIO01_11472 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd Beta-prop_BBS7 Motif Other DBs NCBI-ProteinID:  EXF76983 UniProt:  A0A010RXH5 LinkDB All DBs AA seq 1212 aa AA seqDB search MATTSNMFLYSLTLQSPTNVTQAVLGQFSGTKEQNIVTASGSRLTLLRPDPSQGKVITLL SHDIFGIIRSMAAFRLAGSNKDYLILATDSGRITIVEYIPAQNRFQRLHLETFGKSGVRR VIPGEYLACDPKGRACMIASVEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVLCMVALD VGYANPVFAALEIEYTEADQDPTGEAAREAETQLVYYELDLGLNHVVRKWSEPVDPTASL LFQVPGGQDGPSGVLVCGEENITYRHSNQEAFRVPIPRRKGATEDPSRKRHVVSGVMHKL KGSAGAFFFLLQTEDGDLFKATLDMVEDADGNPTGEVKRLKIKYFDTVPVSSSLCILKSG FLYAASQFGNHQFYQFEKLGDDDEELEFSSDDFPTDPRAGYEAVYFHPRPLENLALVESI DSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIPSAVWT LKLSRGDQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHP KGIRHIRHGQVNEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDGSLAEYDEKKE MFGTVTCLSLGEIPEGRLRSSFLAVGCDDSTVRVLSLDPESTLESKSVQALTAPPSSLAI IAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPVRLFQATVQGRT CVIGLSSRPWLGYSDPITRGFLVTPLNYVDLEWVWNFSSEQCEEGVVGIQGQSLRIFAIE NLGDTITQKSIPLTYTPRRLLKHPEHPMFYTVEADNNTLPPDLRAKLIAEPGVVNGDAVV LPPDEFGYPKGKGRWASCISVIDPLSEDQRVLQTVDLDNNEAAVSAAIVSFASQDNESFL IVGTGKDMVVNPRQFSEGYIHVYRFSEDGHELEFIHKTKVEEPPSALLGFQGRLLAGVGK TLRIYDLGLRQMLRKAQADVAPQLIVSLSTQGSRIVVGDVQHGITYVIYKATTNKLIPFV DDTISRWVTCTAMVDYESVVGGDKFGNMFLVRCPEKASQEADEESGGLHLLNTRDYLHGT PHRLNLLGHSYTQDVPTSITKTSLVVGGQDVLLWSGINGTIGVFIPFVTREDVDFFQNLE QHMRTEDAPLAGRDHLMYRSYYVPVKGVIDGDLCERYTLLPSEKKQMIAGELDRSVREIE RKISDIRTRSAF NT seq 3639 nt NT seq  +upstreamnt  +downstreamnt atggcgacgacctcaaacatgtttctttactccctaacccttcaatcgcctaccaatgtc acacaggcggtgctgggtcagttctctggcaccaaggagcagaacattgtgacagcatcg gggtcgcgattgactttgcttcgcccggatccgtcacagggaaaagtcatcacactcctc tcgcacgatatcttcggcatcatccggtctatggccgccttccgcttggctggaagcaac aaagactatctcatccttgcgactgactctggaaggatcaccatcgtcgagtacattccc gcgcagaatcggtttcagcgtttgcatctagagacttttggcaagtccggggtacgacgc gtcatacctggagaatatcttgcatgcgatccgaaaggcagagcgtgtatgatcgcgtca gtggagaagaacaagctcgtatacgttctcaaccgcaattcgcaggccgagcttacgatc tcttcgcctctcgaggcacacaagcccggagtcctggtgctgtgcatggtcgcgttggac gtcggctatgccaacccggtctttgctgcgctcgagatcgagtacactgaggcagatcaa gatcctacaggagaggcagcccgggaagcagagactcaactggtttactacgagttggac ttgggattgaaccacgtcgtccggaaatggtccgaacctgtcgatcccacggcttcactg ctcttccaagtcccgggtggtcaagatggccccagtggagtcttggtttgtggagaagaa aacatcacatacaggcactccaaccaggaagccttccgtgtgcccattccgcgccgtaaa ggtgcaacggaagacccttccaggaagcggcacgtggtatctggcgtcatgcacaagctg aaaggtagtgctggcgccttcttcttcctcctgcaaaccgaggatggggacctattcaag gccaccctcgatatggttgaggatgcagatggcaatcccactggcgaagtgaagcggctt aagatcaagtacttcgacacggtaccggtatcatccagcctctgcattctcaagagcggt ttcctctacgctgccagccagtttggcaaccaccaattttaccagttcgagaagctcgga gacgacgatgaggaactggaattctcaagcgacgacttcccaacagaccctagggctggt tacgaagcggtctacttccatcccagaccgctagagaatcttgctttggtcgagagtatt gactctatgaacccccttctcgactgcaaggtggccaatctgactggtgaggacgcgcca caaatctacacagcctgcggcaacggtgctcgtagcacattcaggatgctgaagcatggc ttggaagtcaacgagattgttgcatccgaactgcccggcattccctcggcggtttggact ctcaaactgagccgcggcgaccaatacgatgcgtacattgtgttgtccttcaccaacgga actcttgttttgagtatcggtgaaactgtcgaggaggtcagcgattccggtttcttgact tctgtgccgaccttggcagcgcagttgctgggcgaagacggcctcattcaggtccatccc aaaggcattcgccacatccggcatggccaagtcaacgaatgggccgcaccgcagcacaga tccatcgtcgcggcaaccaccaatgaacatcaggtagcagttgcactcagctcgggtgag attgtctatttcgagatggatggtgacggatccctagccgagtacgatgagaagaaggaa atgttcggaactgtcacatgcctgagcttgggtgagatccccgaaggacgcctgcgaagt tcattcctggctgtgggatgtgatgacagcactgtacgcgtcctgtcgttagaccccgag tcgacgctggagagcaaatcagtccaagccttgactgctcctccgtcatcccttgcaatc attgccatggatgactcctcgtccggaggctcaacactctacctccacattggccttcac tctggagtctacctccgtacagtgttggacgaaatcactggagagcttacggatacgagg cagaagttcctcggtcccaagccggtgcggcttttccaagctactgttcaaggacggacc tgcgtgatagggttgagctcccgtccctggcttggctattctgatcccatcactcgaggt ttcctggtgacgcccttgaactacgtcgacctcgaatgggtctggaatttcagcagcgag cagtgtgaagaaggtgtcgttggcattcagggccaatcattaagaattttcgccattgag aacctcggagacaccattacacaaaagtcgatacccctcacctacactccgagacgtctt ctcaagcatcctgaacaccccatgttttacacggtcgaggcggacaacaacacgctgcca cccgacctacgggccaagctcatcgcagaacctggtgtcgtcaatggcgatgctgtggtg ctcccgcctgatgagtttgggtaccccaagggcaaaggccgctgggcttcttgcatcagc gtcatcgaccccttatcagaggatcagcgagttctgcagactgttgacctcgacaacaac gaagcggctgtcagcgctgcaatcgtctcgtttgctagccaggacaatgaaagcttcctg attgttggcaccggcaaggatatggttgtcaaccctcgccagttctctgaaggctacatt cacgtctaccgctttagcgaggatggccacgagctggaattcattcacaaaacaaaggtc gaggagcctccatcagcgctccttggcttccaaggcagactacttgcgggcgttggcaag accttgaggatttacgacctcggcctgagacaaatgctcagaaaggcccaagccgacgta gccccgcaactgattgtatctctgagcacacaaggaagccgtatcgtcgtcggcgacgtc cagcatggcatcacgtatgtcatctacaaggcgacgacaaacaagctcattcccttcgtc gacgacaccatttccagatgggtcacatgcaccgcaatggtggactacgaatcggttgtt ggaggcgacaagttcggcaacatgttcctcgtccgctgccctgagaaggcaagtcaagaa gccgacgaggagtcaggcggcctccatctcctcaacacgagagactacctccacggcaca ccacaccgcctcaacctcctaggccactcctacactcaagatgttcctaccagcatcacc aaaacaagtttggtcgttggtggtcaggacgttctgctctggagcggtatcaacggtacc atcggcgtcttcattccatttgtgacccgcgaggacgtggactttttccagaacctcgag cagcacatgcgcaccgaggatgcgccgctcgccggaagggatcacctcatgtaccgcagt tactacgtccccgtaaagggtgtcattgacggtgatttgtgtgaaaggtacacccttctg cccagtgaaaagaagcagatgattgccggtgaactcgaccgctcagtgagagagatcgag aggaagatatcggacattcgaacgaggtctgccttctaa

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