Colletotrichum fioriniae: CFIO01_11603 Help Entry CFIO01_11603      CDS       T04796                                  Name (GenBank) RNA polymerase Rpb1   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism cfj  Colletotrichum fioriniae Pathway cfj03020   RNA polymerase cfj03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:cfj00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CFIO01_11603   09124 Replication and repair    03420 Nucleotide excision repair     CFIO01_11603  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cfj03021]     CFIO01_11603    03400 DNA repair and recombination proteins [BR:cfj03400]     CFIO01_11603 Enzymes [BR:cfj01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CFIO01_11603 Transcription machinery [BR:cfj03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      CFIO01_11603 DNA repair and recombination proteins [BR:cfj03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       CFIO01_11603 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Motif Other DBs NCBI-ProteinID:  EXF80320 UniProt:  A0A010QUL7 LinkDB All DBs AA seq 1750 aa AA seqDB search MANLYFTHSSAPIKTVEEIQFGLMAPEEIKNMSVCHCVYPETMDETRTKPRDGGLNDPLL GSIDRQFKCKTCNQAMGECPGHFGHIELAKPVYHPGFIKKVKKVLEIVCHNCSKVLADRS DPEFLQAVNTRDPKVRFNRIWNICKKKTRCENEVKEQKPDDGEYGLNMKQAPVNHGGCGN IQPRVRHKALQLIAKYEAQGEDGVKKKEEPPITPEMAHNILRRISDDDLRDMGLNLEYAR PEWMIVTVLPVPPPPVRPSISMDGTGQGLRNEDDLTYKLGDIIRANSNVKQAIREGSPAH IAQDFEQLLQYHVATYMDNDIAGQPRALQKSGRPVKAIRARLKGKEGRLRGNLMGKRVDF SARTVITGDANLSLDEVGVPRSIARTLTYPETVTPYNIGRLHELVQNGPNEHPGAKYVIR SDGTRIDLRHHRRAGQISLEYGWKVERHLITGDYIIFNRQPSLHKESMMGHRVRVMPYST FRLNLSVTSPYNADFDGDEMNLHVPQSEETRAEVKELCLVPINIVSPQRNGPLMGIVQDT LAGAYKLCRRDVFLTKEQVMNIMLWVPNWDGNIPQPAIIRPRPRWTGKQIMSMAVPNIVS LHSAPDSKEENPLKDEGLLIQSGQIMYGLLSKKNIGAASGGIVHIVYNEHGPQAAMKFLV GVQQTVNYWLLHNGFSIGIGDTIPDKITIEKVQIHIDEHKAEVEEFTRQATANELEPLPG MNIRETFESKVSKALNTARDKAGTTTQKSLKDLNNAVTMASSGSKGSSINISQMTALVGQ QIVEGKRIPFGFKYRTLPHFTKDDYSPEARGFVENSYLRGLTPSEFFFHAMAGREGLIDT AVKTAETGYIQRRLVKALEDVSAKYDGTVRNSLGDILQFLYGEDGLDAIYIEKQRMDHLN MSHKKFADRFRLDVMDENRPEELEWLEYGNEMAGDPAVQQLLDEEFDALLSDRKQVREIN FKRKDDESMQLPLNLIRLMETAKKLFAVEDFQRSDLRPQDVIPKVQQMLNRMTIVRGKDD ISKEADYSATILFKAQIRSRLAFKRIACQQRLNKMAFEHVLGELEARWDRAFVSPGEMVG VIAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNLAQNIKTPSMVVYLSGEDN ASQEAAKQLRSTVEHTTLRSVTAVTEIYYDPEITSTNIPDDLDMVESYYLIPDESHDKTE DQSRWLLRLTLDRQKLLDKELTVEDVARRIKEEYPNDLAVIFSDNNAEEQIIRIRPMHAG NDKDEDGEKKIEDDVMLKRLETHLLDTLSLRGVKGIERAFLNKEVKLIETEDGALLAAKA DERCSEWYLDTSGTALRQVLAVDGVDSNRTYTNHLWQVVEVFGIEGARAALIRELTQVLA FDGSYVNHRHLALLCDVMTYRGTISAVTRHGINRADTGALMRCSFEETVEILLEAAAVGE LDDCRGISENVMLGQMAPMGTGHFDVLLDPKMLETVISDNSRMGLMPGMPVKGGEAGGAA TPYDSGSPMADSGYMSLSSPAAGNFSPIVGAGSDSPTGFGTEYGGGGFGGMSVNPYSASP GRPTSPFSTSPTSPFSSGYGGYSPSSPNAGYSPTSPLIDGAAGRYGATSPQFSPSSPSFS PTSPMLRPTSPASPNYSPTSPSYSPASPSSPRHYSPTSPAQYASPTSPSYSPASPNYSPA SPNLHGAGPTSPSYSPASPTWSPTSPAQYSPTSPSFQQTPGAQQSPTSPSYSPTSPSWSP RTPGPGGSGN NT seq 5253 nt NT seq  +upstreamnt  +downstreamnt atggcgaacctttacttcacgcactcgagtgcgccgatcaaaacggtcgaggagattcag tttggcctcatggctcctgaggagatcaagaacatgagtgtctgtcactgtgtctacccc gagaccatggacgagacgcggacaaagcctcgcgacggcggtctgaacgatcctctcctc gggtctatcgatcgtcaattcaagtgcaagacctgcaatcaggcgatgggtgaatgtcct ggacatttcggccacatcgagctggcgaagcccgtctaccatcctggctttatcaagaaa gtcaagaaggttttggagattgtctgccataattgcagcaaggtcttggccgacagaagc gaccctgaatttctccaagctgtgaacacgagagaccccaaggttcgcttcaaccgaatt tggaacatttgcaagaagaagactcgttgcgaaaacgaggtcaaggagcagaagcccgac gatggagagtacggcctgaacatgaagcaggctcccgtcaaccacggcggctgtggaaac atccagccaagggtacggcataaggctctgcagctcattgcaaagtacgaggctcaaggt gaagacggcgtgaagaagaaggaggagcccccaattactccagagatggcccacaacatc ttgcgtcgcatcagtgacgacgacctgagagatatgggcctcaatctcgagtacgctcgc ccagagtggatgattgtgaccgttcttcccgttccgcccccacctgtccgtcccagtatt tctatggacggaaccggtcagggactcagaaacgaagacgatttgacctacaaactcggt gatatcatccgcgccaacagcaacgtcaagcaggccattcgcgaaggctcgcctgctcat attgcgcaagatttcgagcaacttttgcagtaccatgtggctacgtacatggacaacgac atcgccggtcaacctcgtgcgctgcaaaagagtggtcgtcccgtcaaggctattcgtgca cgtctcaagggcaaggagggtcgtcttcgtggcaatttgatgggaaagcgtgtcgacttt tcggcacgtactgtcattaccggtgatgccaacttgtctcttgacgaggttggtgttcct cgcagtatcgcaagaactcttacgtacccggagaccgtcactccgtacaacatcggcagg cttcacgagcttgttcaaaacggacccaacgagcatccaggagccaagtatgtcattcgc tccgacggtacaagaattgatttgcgtcatcatcgcagagctggacaaatttctctggaa tacggctggaaggtcgagcgtcatttgattacgggcgattatatcattttcaaccgtcag ccatctctgcacaaggagtccatgatgggtcacagagtccgcgtcatgccctactcaact ttccgtctaaacttgtccgtcacctctccctacaacgccgatttcgacggtgacgagatg aaccttcacgtcccccaaagtgaagagacgagagctgaagtcaaggagctgtgcttggtc cccatcaacatcgtttccccgcaaagaaacggtcctctgatgggtattgtgcaggacact cttgctggtgcctacaagctgtgtcgtcgtgatgtgttccttaccaaggagcaggtcatg aacatcatgctgtgggttcccaactgggatggcaacattccccaacccgccatcattcgg cccagaccaaggtggactggtaagcagatcatgagcatggcagttcccaacattgtcagc ttgcacagcgcccctgattcgaaggaggagaaccccctgaaggacgagggcctcctgatt cagtcaggacagatcatgtacggtctgctttccaagaagaacatcggtgctgccagtggt ggtatcgtccacattgtctacaatgagcatggacctcaagcagccatgaagttcctggtt ggcgtccagcaaacagttaactactggctgctacacaacggcttcagtatcggtatcggt gacacgattcccgacaagatcaccattgagaaggtccagatccacattgacgagcacaag gccgaggtcgaggagttcacaagacaagctactgctaacgagctggagcctctgcccggt atgaacattcgtgagaccttcgagagcaaggtttcgaaggccctgaacaccgctcgtgat aaggccggtaccactacacagaagagtttgaaggatttgaacaatgcagtcaccatggca tcgtccggttccaagggttcatcgatcaacatttcccagatgactgccctggtcggacaa caaatcgtcgaaggaaagcgcattcctttcggcttcaaataccgcaccctgccgcatttc acaaaggacgactactcacccgaggctcgtggtttcgtcgagaactcgtatctccgtggt ctcacacctagcgagttcttcttccacgccatggctggtagagaaggtttgatcgatacc gcggtcaagacagccgagaccggttacatccagcgtcgtctcgtcaaggcgctcgaggac gtcagtgccaagtacgatggtaccgtcagaaactctttgggtgatatcctacagtttctg tacggtgaggatggtctcgacgccatctacatcgagaagcagcgtatggatcacctcaac atgtcacacaagaagttcgccgaccgattccgcctggacgtcatggacgagaacaggccg gaagagcttgagtggcttgagtacggcaatgagatggcaggcgacccagccgttcagcag ctcctggatgaagagttcgatgctttgctctctgatcgcaagcaagttcgtgagatcaat ttcaagaggaaggatgatgagtcgatgcagttgcccttgaacttgattcgtcttatggag acagccaagaagctctttgctgttgaggatttccagcgaagcgacttgcgacctcaagac gtcattcccaaagtacagcagatgctcaacagaatgaccatcgtccgtggcaaggatgac atctccaaggaggctgattacagcgccacgattctcttcaaggcgcagatccgctctcga ctcgcgttcaagcgcattgcttgccagcagcgcctcaacaagatggctttcgagcacgtc ttgggagagcttgaagcccgctgggaccgagcgtttgtcagtcctggtgagatggtcggt gtcattgcggcccagtctattggtgagcctgctactcagatgacactgaacactttccat ttcgctggtgtctcgtccaagaacgtcactctcggtgtccctcgtctcaaggaaattctc aacttggcccagaacatcaagactccttccatggttgtctatctgagtggcgaggacaac gccagtcaagaagctgcgaagcaacttcgaagcacggttgagcacacgaccttgcgctcc gtcacagctgtcaccgagatctactacgacccggagatcacttcgaccaacattcccgat gatcttgatatggttgagtcttactaccttatccccgatgagtcacatgacaagacggaa gaccaatctagatggctgcttcgtcttactctggaccgccaaaagcttcttgacaaggag ttgactgtcgaggacgttgctaggcgcatcaaggaggagtaccccaacgatcttgctgtc atcttcagtgataacaacgctgaagagcaaatcattcgtattcgtcccatgcatgcgggc aatgacaaggacgaagatggtgagaagaagattgaggacgatgtcatgttgaagaggctt gagacccatttgctcgacactctctcccttcgtggtgtcaagggcatcgagagagccttc ttgaacaaggaggttaagctcatcgaaaccgaggatggtgccctgctggctgcaaaggcc gacgagcgctgctcagagtggtacttggatacctctggaacagctctgcgccaggtcttg gcagttgatggcgttgattccaaccgcacgtacaccaaccacttgtggcaggttgtcgaa gtcttcggtatcgagggtgcgagagcggctctcatccgtgagttgactcaggtgcttgcc tttgacggttcctacgtcaaccacagacatcttgctcttctctgtgacgtgatgacatac agaggtacgatctctgccgtcactcgtcacggtatcaacagagctgacaccggtgctctg atgcgttgttctttcgaggagactgtggagattcttctcgaggctgcagccgtcggtgag ttggacgactgccgtggaatatccgagaacgttatgcttggtcagatggcccccatggga actggtcactttgacgttctccttgaccccaagatgctggagaccgtcattagcgacaac tcgcgcatgggtctcatgcctggcatgccggtcaagggtggcgaggctggcggtgctgcc acaccttacgattctggatctcccatggcggattctggctacatgtctctcagctcgccc gccgccggcaacttctcccccattgttggtgctggttccgattctcccactggttttggt accgagtacggtggtggtggatttggtggcatgagtgtcaacccctactccgccagtcct ggacgaccgacgagccctttcagtacttccccaacgtcgcctttcagcagcggctatggc ggatactcgccgtcatctcccaacgccggctactcacccacatcaccgctcatcgacggt gccgccgggcgttacggagctacctcgccgcagttcagtccctcgtcgccctctttctcg ccaacatcgcccatgctccggcccaccagccctgcaagccccaactacagcccgacatca ccaagctactcgccggcatcaccctcttcgcccaggcactactccccgacatcgcctgcg cagtatgcttcacccacttccccgagctactcgccagccagtcccaactatagccctgca tcccccaaccttcatggggctggtcccacgtcaccgtcgtactctccagcgtcgccgacg tggtctcctacttcaccggctcagtattcgcctacgagcccgagtttccaacagactcca ggagcccagcagtctccgaccagccccagctattcgcctacttctccctcttggtctccc cggacacctggacccggcggctctggcaactag

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