Colletotrichum fioriniae: CFIO01_11638
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Entry
CFIO01_11638 CDS
T04796
Name
(GenBank) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03022
Basal transcription factors
cfj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CFIO01_11638
09124 Replication and repair
03420 Nucleotide excision repair
CFIO01_11638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_11638
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_11638
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_11638
Enzymes [BR:
cfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CFIO01_11638
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CFIO01_11638
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CFIO01_11638
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CFIO01_11638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
DEAD
ResIII
AAA_22
AAA_11
SLFN-g3_helicase
nSTAND3
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
EXF84906
UniProt:
A0A010RWI5
LinkDB
All DBs
AA seq
791 aa
AA seq
DB search
MKFFIDELPVLFPYPSIYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQ
QHNPEHRKLIYCSRTMSEIEKALAELKALMKYRAQELGEEEEFRGLGLTSRKNLCLHPSV
KQEKSGSVVDARCRSLTAGFVKEKKDRGENVDVCVYHDNLDLLEPHNLIPNGVWTFEGLL
KYGEQHKQCPYFTARRMMQFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDN
VCIESLSTDITEDSLRKATRGAQNLERKITEMRDTDQEQLQNEYQKLVEGLRGADEARQE
DAFMANPALPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVRHTISETPPSFLAHL
REYTFIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPF
ESETAEVPNPVLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLGFSTVVQESY
SMTLARRSFLPMIVTRGSDQSSISTSFQVRNEPSVVRNYGTLLTEFAKITPDGMVVFFPS
YLYMESIISMWQGMNILEEVWKYKLILVETPDAQETSLALETYRTACCNGRGAVLLCVAR
GKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHAA
QCLGRVLRGKDDYGIMVLADRRFQKKRTQLPKWINQGLLDADTNVSTDMAVSSARRFLKQ
MAQPFRAKDQEGVSTWSYEDLMRHKEKMDLERIQELEEVGAGGDGYGADGGDEYGMDDNL
DHDLMEIDDGF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttcatcgatgaattaccagtcctttttccatatccttcgatctaccctgag
caatatgcatacatgtgtgatctcaaaaagaccctggacgcaggggggcattgtgtcttg
gagatgccttcagggacaggaaagacggtttcgctactctcgctcatcgtcgcctaccag
caacacaaccccgagcaccgaaagctgatttactgctctcgtacaatgtccgagatcgaa
aaggctctcgccgagctcaaggctctcatgaagtatcgagcacaagaacttggcgaggag
gaagagtttcgtggcctcggcttgacaagtcgaaagaacctatgccttcacccctctgta
aaacaggagaagagcggttccgtcgtcgacgcacgctgtcgaagcttgacggcaggcttt
gtcaaggagaagaaagaccggggcgagaacgttgacgtttgtgtctaccatgataacttg
gaccttcttgagccgcacaacttgattcctaacggagtttggacgttcgaaggcctcttg
aagtacggcgagcaacacaagcaatgtccgtacttcaccgcaaggcgcatgatgcaattc
tgcaacgtcatcatctactcgtaccactacctactcgatcccaaaatcgctgagagggta
tcaagagagctctcaaaagactgtatcgtggtttttgacgaggctcacaatatcgacaac
gtttgcatcgaatccctcagcacagacatcacagaagactctctacggaaagccacaaga
ggcgcgcagaacttggaacggaagattacagaaatgagggacactgaccaagagcaacta
caaaacgaataccagaaactagttgaaggacttcgcggcgcagatgaagcacggcaagaa
gatgccttcatggcgaacccagcacttcccgatgatctgctcaaggaggcggttccgggt
aacatcaggagagcggaacactttgtgtccttcctaaagagattcatcgagtatctcaag
actaggatgaaggtcagacatacgatatcagaaacgcccccatcttttctcgcccatctc
agagaatacacgttcatcgaaaagaagccactgaggttttgcgccgaaagattaacgtcg
cttgtgcggaccctcgagcttaccaatattgaggactatcaacctttgcaggaagttgct
acattcgcaacgcttgtggcgacttacgagaaaggtttcctgctcatcctcgagcctttc
gagtcagaaacggcagaggtacccaaccctgtcctgcatttcacgtgtctcgatgcagcc
atcgccatcaagcccgtctttgacagatttagctccgtcatcatcacgtcaggaacaatt
tcacccctcgaaatgtatccaaagatgctggggttctcgaccgttgtacaggagtcatac
agcatgaccttggccagaagatcgttcctgccaatgatcgtcactcgtggaagcgaccaa
tcttccatctcgaccagtttccaggtccgaaatgagccgagtgtcgtccgaaactacggc
actctcctcaccgaattcgccaaaatcacgccagacggcatggtcgtcttcttcccctcc
tacttgtacatggagtccatcatcagcatgtggcagggcatgaatattctcgaggaagtc
tggaagtacaagctgattctggtcgagacaccagatgcacaggagacgtctctcgcgcta
gagacatatcggacagcctgctgcaacggccgcggcgccgtactactctgtgtcgcccgt
ggcaaggtctcggagggcatcgatttcgatcaccaatacggtcgaaccgtgttgtgtata
ggcgtgccgttccagtacactgaatcccgcatcctcaaggcccgtctcgagttcctgcga
gaaacgtatcgcatccgcgagaatgacttcctatccttcgatgctatgcgccatgccgcg
cagtgtctcggccgagtcctgagaggaaaggacgactacggcataatggtcctcgcagac
cgcagattccagaagaagcggacgcagctacccaaatggatcaaccagggcctgctcgat
gctgacacaaacgtcagcacggacatggccgtcagcagcgcccggcgtttcctcaagcag
atggctcagccgttccgagcaaaagaccaggaaggcgttagcacctggagttatgaggac
ttgatgaggcacaaggagaagatggacttggagcgaatccaggagctcgaggaggttggc
gctggtggggatggctatggcgccgacggaggtgacgagtatggcatggatgacaacctc
gaccacgacttaatggagattgacgacgggttttga
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