Colletotrichum fioriniae: CFIO01_11971
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Entry
CFIO01_11971 CDS
T04796
Name
(GenBank) Sec63 Brl domain-containing protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_11971
Enzymes [BR:
cfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CFIO01_11971
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CFIO01_11971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Helicase_PWI
Motif
Other DBs
NCBI-ProteinID:
EXF85880
UniProt:
A0A010RB21
LinkDB
All DBs
AA seq
2006 aa
AA seq
DB search
MASANLDNAEAQWRAQFEAMKTALAGLKLPSEPPSDVDFDDEYEGYSSGNGAQDVWDFIS
DDEDDEYSSDQLDGHDATNGDAAYGAAWFVSKCSSIAAKNGLAEDVFQNQIISILTSGQG
DEELQSQLADLVGFDDFDFIIELLGHRNEIVTAVTSQGSQEPKGKLLSKAQREEALRRQD
FEHKNATLAPAMTREVQYPHVYKSYNAGNSLSHSGQKYGLPSGSERLLFDKYEEYAIPAG
KKGVLGPGQRLVKISDMDGLCRGTFKGYKALNRMQSLVHPVAYKTNENMLICAPTGAGKT
DAAMLTILQTIGHYCTPNPIEDITTTDFAVDLQDFKIVYVAPMKALAAEITEKLGKRLAW
LGIKCREFTGDMHLTKAEIVQTQIIVTTPEKWDVVTRKGTGDTELVQKVRLLIIDEVHML
HDERGAVLESLVARTERQVESTQSLIRIVGLSATLPNYVDVADFLKVNRHAGMFYFDASF
RPVPLEQHFIGVKGKAGSKASRENLDTVAFEKVRDMLQKGHQVMVFVHSRRDTLLTAKML
YEKAIEDFCVDLFDPTDHPNYENAVRDMKQSKARDLRELVPKGLGIHHAGMARSDRNLME
RLFGEGVLKVLCCTATLAWGVNLPAAAVVIKGTQVYSAQEGKFVDLGILDVLQIFGRAGR
PQFEDTGIGMICTTQDRLHHYLTTVTEQQPIESKFSTKLVDNLNAEISLGTVTSIPEAVQ
WIGYSYLFVRMQRSPMSYGIEWAEIRDDPTLVQRRRTLAIQAARTLQQSQMIIFNEVTEE
LRSKDIGRIASQYYILHTSVQIFNTMMRPMATEADILKMIAMSGEFDNIQSRDSEEKELT
RLRNDVVPCDVDGGIDTPQAKTNILLQAYISRAQPEDFALGNDLNYVAQQAGRICRALFM
IALNRRWGHQCLVLLTLAKSIEKRIWPFQHPLHQFDLPKSVFNQLDAKDNMTVEAMRDME
SAEIGSLVHNQNAGKKIAHILNNFPTISVEAEIAPLNRDVLRIKLFIEPDFRWNDHIHGT
SESYYIWVENSETSEIYHHEFFLLNRRKLHDEHELNFTIPLSDPLPTQIYVRAVSDRWLG
AETVTPVSFQHLIRPDTESVYTDLLNLQPLPISALKNPALEEIYAQRFQYFNPMQTQIFH
TLYHTPANVLLGSPTGSGKTVAAELAMWWAFRERPKSKVVYIAPMKALVRERVKDWGARL
ARPLGLKLVELTGDNTPDTRTIKDADVIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIH
LLAGDRGPILEIIVSRMNYIAASIKNSVRLLGMSTACANATDLGNWLGVKEGLFNFRHSV
RPVPLELYIDGFPEVRGFCPLMQSMNRPTFLAVKTHSPDKPVIVFVPSRRQTRLTAKDLI
NYCGMEDNPRRFLHMDEDDLQLNLARVKDDALKEAISFGIGLHHAGLVESDRQLAEELFL
NNKIQILVATSTLAWGVNLPAHLVVVKGTQFYDAKIEGYKDMDLTDVLQMLGRAGRPQFD
NSGVARIFTKDAKKDFYKHFLHTGFPVESSLHTVLDNHLCAEVSAETIVTKQDALDYLTW
TFFFRRLHKNPSYYGLEISAEEHNSIAAQTMANDYMIEMIDKSLDELARSSCVEVFPNGD
VDPTPMGKIMSYYYLSHITIRHLVKHVKAAASLLDVLSWMSRATEYDELPVRHNEDLINE
ELSRNLLFPGSSFGLPMWDPHVKAFLLLQAHMSRISLPITDYVGDQTSVLDQAIRIIQAS
IDVTTELGHLSTCLQFITLLQCIKSARWPTDPPPSILPGVGLDTLKTDKSNLTLAKISAL
ASSPSKITSLAKQLSVPPHQQPRFAKAAAQLPNLAVSVPAAETTALGITVDLRRLNALTE
RDAHVYAPRFPKPQNEGWFVLLADPARDDVLAVKRAGWSGGGPGRGVAVGSKPTARVAIK
VPETAQGKKLEVIVVSDAYVGLEYRATVDVPAAPVVDDDVDKSKKAQLQQRGDAQLTEGN
AMNADDVKPTAAAAAAAAAAGREAPI
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaaatctcgacaacgcagaggcccagtggcgagcccagttcgaggccatg
aaaacggctttggctggtcttaagctcccctcagaacccccctcggatgtagatttcgac
gatgaatacgaaggctactcctcaggcaacggcgcacaggacgtctgggacttcatctca
gacgacgaagatgatgagtacagcagcgaccagttagacggtcacgacgccaccaacggc
gacgctgcttacggcgccgcctggttcgtgagcaagtgctcatccatcgccgccaaaaat
gggttggccgaagacgtcttccagaaccagatcatcagcatccttacatccggccaaggc
gatgaagagctccagtcccagctcgccgatctcgtcggcttcgacgactttgactttatt
atcgaactgctcggccaccgcaacgagattgtcacggccgtcacctctcaaggttcccag
gagcccaagggaaaactcttgagcaaggcacagcgtgaggaggccttgaggcgacaggac
tttgagcacaagaatgcgactctcgcgcccgccatgaccagagaagtccagtacccccac
gtgtacaagtcatacaacgccggaaactccctcagccactctggccagaagtacggcctt
ccaagcggcagtgaaaggctactattcgacaagtatgaggagtatgccattcctgcaggg
aagaagggggttctgggtcccggccagagactggtcaagatttcagacatggacggcctg
tgtcgcggcaccttcaagggatacaaagcactcaatcgaatgcagagtctggtccaccca
gtcgcatacaagacaaacgagaatatgctcatctgtgcccctactggtgctggtaaaacg
gatgctgcgatgctcacaatcctccaaaccattggtcactactgcacacccaaccccatt
gaagacatcactaccacagacttcgcagtcgatctacaggacttcaagattgtctatgtt
gcgcccatgaaggctttggctgcggaaattaccgaaaagctcggcaagcgactggcatgg
ttaggcatcaagtgccgtgaattcactggagatatgcacctgaccaaggccgaaattgtg
caaacccaaatcatcgtcaccacccctgagaagtgggatgtcgtgacgagaaagggaact
ggcgataccgagttggtgcagaaagtccgtctcctgatcattgacgaggttcacatgctt
cacgatgagcgtggtgctgtcttggaatctctcgtcgccagaaccgagcgccaagtcgag
agcacccagtcgttgattcgtatcgtcggcctcagtgccacgcttccgaattatgtggat
gttgccgacttcctcaaggtcaaccggcacgccggtatgttctactttgacgcttcattc
cgtcccgtgcctttggagcagcacttcattggtgtgaagggtaaagctggttccaaggcg
tccagagagaacttggacaccgttgcctttgaaaaggttagggacatgcttcagaaaggc
caccaagtcatggtctttgtccattcgcggcgagatactctcctgacggccaagatgctg
tacgagaaggccatagaagatttctgcgtggatctattcgatcccaccgaccacccgaat
tacgagaacgccgtacgagacatgaagcaatccaaggcacgagacctgcgagaattggtg
cccaagggcttgggcattcatcacgctggtatggcacgctccgacagaaatcttatggag
aggctcttcggagagggtgtcctcaaggttctctgctgtacggcgactctcgcctggggt
gtcaacttgcccgcggcagcggtcgttatcaagggaacccaagtgtacagcgcacaggag
ggtaaatttgtcgatctcggcattcttgacgtgttgcaaatctttggtcgtgccggtcgt
ccccaattcgaggacaccggtatcggtatgatttgtaccactcaagacaggctccatcac
tacttgaccaccgtcacagagcagcagccgatcgagtccaagttttccaccaagctcgtc
gacaatctgaatgctgagatttccctcggtactgtgacgtcgattcccgaagctgttcag
tggattggatactcgtacctctttgttcgcatgcaaagaagtccaatgagctacggcatc
gaatgggctgaaattcgggatgatcccacgcttgttcagagacgtcgcacgctagctatc
caggctgcccgaactcttcaacagagccagatgatcatcttcaacgaagtgaccgaggag
ctgcgcagcaaggatatcggccgcattgccagtcagtactacatcttgcacacgagtgtt
cagatcttcaacaccatgatgcgacccatggctactgaggccgatattctaaagatgatt
gctatgagcggagagtttgacaatattcagtccagagactctgaagaaaaagagctcacg
cgtctgagaaacgatgtcgttccttgcgacgttgatggcggcattgacacgccccaggcc
aagaccaatatcctgctgcaggcatacatctcgagagcgcagccagaagactttgctctt
ggcaatgatctcaactatgttgctcagcaggcgggtcgtatttgcagagccttgttcatg
attgctctgaataggagatggggacatcagtgtctggttctactcaccctcgccaagtct
attgaaaaacgcatctggcccttccaacaccctctacaccagttcgatctccccaagtcg
gtcttcaatcagctcgatgccaaggacaacatgaccgtggaggcaatgagagacatggaa
tctgccgagattggtagcctggttcacaaccagaatgcgggcaagaagattgcccatata
ttgaacaatttcccgaccatcagcgtcgaagcggaaattgcacctctcaaccgcgacgtt
cttcggatcaagttgttcatcgagcctgacttccgatggaacgaccacattcacgggact
tccgagtcgtactacatctgggtcgagaactctgagacctctgagatctaccatcacgag
ttcttccttctgaacaggaggaagctccacgatgagcacgagctcaacttcaccatccct
ctttcggatcccttgcccactcagatctacgtgcgggcagtatctgaccgatggcttggc
gctgagacggtgacgcccgtttctttccagcacttgattcgcccagacactgagagcgtg
tacactgatctcctcaacctgcaaccgcttccaatcagtgctctcaagaacccggctctc
gaggagatttacgcccagcgcttccagtacttcaaccccatgcagactcagattttccac
accctctaccacacacccgccaatgttcttctcggatctcccactggtagtggaaagacc
gttgcggcagagctggcgatgtggtgggctttcagagagcggccaaaatccaaggttgtg
tacattgcgccgatgaaggctctggttcgcgagcgtgtcaaggattggggagctagactc
gctaggccactgggactgaagctggtcgaactgacaggtgacaatacccctgatacgcgc
actatcaaggatgccgacgtcatcatcactacgcccgagaaatgggacggtatctctcgt
agttggcagacgagaggctacgttcgacaggtgagtctcgtcattattgacgagattcat
ctcctcgctggtgatcgtggtccaattctggagatcatcgtttctcgcatgaactacatc
gcggcatccatcaagaactctgtccggctcctgggtatgtcgacggcatgcgccaacgcc
actgacctgggcaactggctcggtgtgaaggaaggcctgttcaacttccgccactctgtg
cgtccggttcccctggagctgtacatcgacggtttccccgaagtcaggggcttctgcccg
ctgatgcagtccatgaaccgcccgacgttcctcgctgtcaagacgcacagcccggacaag
cctgtcatcgttttcgtaccttctcgaagacagacgcgcctgacggctaaagacctcatc
aactactgcggcatggaagacaaccctcgccgattccttcatatggacgaggacgacctc
cagctcaatctcgccagggtcaaggacgatgctctcaaggaagccatcagctttggtatc
ggactccaccacgccggtctcgtcgagtccgatcgtcaactggccgaggaacttttcctg
aacaacaagatccagatcctcgtcgccaccagtaccctcgcgtggggtgtcaacctgccg
gcccacctcgttgtcgtcaagggcacacagttctacgacgcaaagattgagggttacaag
gacatggaccttacggacgtcctccagatgctgggacgcgccggccgtccgcagttcgac
aactctggcgtggctcgcatcttcacaaaggatgccaagaaggacttttacaagcacttc
ctccacaccggcttccccgtcgagtcatccctccacacggtcctcgacaaccatttgtgc
gccgaagtctcggccgagaccatcgtcacgaagcaggacgccctcgactatctgacctgg
accttcttcttccggcgtctgcacaagaacccgtcatactacggccttgagatctcggcc
gaggagcacaacagcatcgccgcccagaccatggcaaacgactacatgattgaaatgatt
gacaagtccctcgacgaactcgcccgctccagctgcgtcgaagtcttccctaatggcgac
gtcgatcccaccccgatgggcaagataatgagttactactacctctcccacatcaccatc
cgccacctcgtcaagcacgtcaaggctgccgcctccctcctcgacgtcctctcctggatg
tcccgcgccacagagtacgacgagctccccgtccgccacaacgaagatctcatcaacgag
gaactctcccgcaacctcctcttccccggcagctcctttggtctccccatgtgggacccc
cacgtgaaagccttcctcctgctccaggcacatatgtcgcgcatttccctccccatcacc
gactacgtcggcgaccagaccagcgttctcgaccaggccatccgtatcatccaggcctcc
atcgacgtcacaaccgagctaggccacctctccacctgcctgcagttcatcaccctcctc
cagtgcatcaaatctgcccgctggcccaccgacccgccgccctccatcctcccgggcgtc
ggcctcgacaccctcaagacggacaaatccaacctcactctcgccaaaatctccgccctc
gcctcctcgccatccaaaatcacctccctcgcaaaacagctctccgtcccgcctcaccaa
caaccccgcttcgccaaagccgccgcccaactccccaacctcgccgtctccgtcccagca
gcggaaaccacagccctgggcatcacggtcgacctccgccgcctgaatgccctaaccgaa
cgcgacgcccacgtctacgcgccccgcttcccgaaaccccaaaacgaaggctggttcgtc
ctcctcgccgatccggcccgcgacgacgtcctcgccgtcaagcgcgcgggctggtccggc
ggtggaccgggccgcggcgtcgccgtcgggtctaagcctaccgcgcgcgtggctatcaag
gtccccgagaccgcgcagggcaagaagctcgaggtcattgtcgtcagcgacgcgtatgtt
gggctggagtaccgcgctaccgtcgacgtccccgcggcgccggtggttgatgatgacgtg
gacaagtccaagaaggcgcagcttcagcagcgtggtgatgctcagttgacggaaggaaat
gctatgaatgcagatgatgtgaaacccactgctgctgctgctgctgctgctgctgctgct
gggcgtgaagcccccatctag
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