Colletotrichum fioriniae: CFIO01_12013
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Entry
CFIO01_12013 CDS
T04796
Name
(GenBank) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_12013
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CFIO01_12013
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-ProteinID:
EXF74387
UniProt:
A0A010Q3K6
LinkDB
All DBs
AA seq
1629 aa
AA seq
DB search
MAFSFANQGSATAGGGGGLTQGPELEVIQTEALGFKSIAGDAKLQLTPAWSPPPADTASL
ISIASRRGLVAAAGPDGITITSTDSVRKGFESEKEGDSDVRAFQPQGKLPMSMRVSQLAF
SADENYLILSAESGGGLAVYEVESLLQGATKAAFELATNGETLRALFPNPTIEKAELCAI
VTNNGNLHMANLKERSVSNVLKAQVSCISWSTKGKQLVAGLADGTIFQMTPEGEAKGEIP
RPPNVSDAHVSSLTWLENHLFLAIHTSTSESPPSSVYHLITRKLPSDFTFQKLNDPVDPF
GAEKPPHHSILRLKEFPPNLSDLLIVASTVSPDIGLLSRAKSPLTSDHPVDTAGVFTTTE
LADDSKRASLPMNDSYENTIPIGVALDLSAKDKVYKPLPADEEIEDSPGPVPGLWVLNNE
GVLSSWWIIYEDSIRQGTTYPGMAALDTSAPPAGASTSTPAAAPAPAPASNTSAFGAPSS
TPAFGSASALGSGQKASPFGSSGSKIPTFGGSSALGSKASPWGAATTSSAAPAASGSTFG
SGSPFGGSSATSGSPFAQASATKSAFGTGGSFGSPSATTPAANKSAFGSGSTFGAPSAAS
SNAPKSAFGSGXXXXFGTPSATPSDAPKSAFGSGSAFGTPSATPSAAPKSAFGSGSAFGT
PAASAGPAFGQPSSVGFGQSSSLGQKSSPWASGGASGANTSASPAFGQPSSFGTSENKSV
FGGGSAAKPASASGGFSSFASSGGFGSLGNKANEGGSVFSSKPSSSPFGSGGQLGTASKD
TAFPPPSSTGPATSNPFSQPFKLGTTFEADPSAKDDDEKPSTPGGSSLFGSNFGSALGSA
VTKTPPKETTTEPNEETPKPKSVFSLGQSTTPKETPAPSKFGFPPTSTSAPKSGLFGFPS
QPATGGLFGSAKPAEKTPEVKAESSTPLPPDTTSKNSYPLGDSSSSSGTGNVPSDGGSKA
SPQVDNAPLPPDFLTTPKATSTKAANAAPLPPDFLKPSKPQGSTTPADEAPLPPDFLTPK
PGKTAVSATPSAALPLPADDQSSPEELERPKSTAPAAAPDFLKMPKQSLSSATWSSTPQN
TTPAVNDAPLPPDFLAKPKEPVFASIPTVPDSEHDTDLEDEDDDDESEGSGVIVSKDQSP
SMTAMTPTAGMTPQSSFGGVSSSTYSVPRTEEERPRASLFGDLSRNAPMFPRPSQTSPRS
PSPVRGAVPGRIMRQESARSVSAPGMASQILAAQKKQPSQMGSSIVGNKSNDDHFIAQQR
LARQRRQAEETRALEDEEDDEIQKILASKIEPTLKLDDFIAHSNVVPSAKETIPAQVEAV
YRDINSMIDTLGLNARSLASFLMGHDIGFKAGGRHKQDLENPDSWVLCEIDELGEVVDRS
LAQDLEDGRVHDVEEKLEACNELAREMSRLRSKQDDLKKIIMVKTDPDQADISRSLPLST
EQASQQNELRREYTNFTKLLAEAEEALTILKTRIAAANSASGKGNSNMPTVEAVMRTIGK
MTSMVEKRSGDIDVLENQMRKLRFSSVNSREGSPMVTPQRNSRSILFSPERSAVMASPGT
LRNSMVSSVASYGGRGGTGTPPRKKLSGFSGEEKSELMAKRAKRQAVLNKLKANVERAGV
SAWAMEDIE
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagcttcgcgaaccaaggaagtgccacggccggaggaggaggaggactgact
caaggccccgagctggaggtgatccagaccgaggcgcttggtttcaagtcgattgccggc
gacgcgaagctccaactcacacccgcctggtccccgccgcccgccgataccgcctcgctc
atcagcattgcctcccgccgaggcctcgtcgccgccgccggacccgacggtatcaccatc
acctcaaccgactcggtgcgcaagggcttcgagagcgaaaaggagggcgattccgatgtc
cgcgccttccagccgcagggcaagctgcccatgtctatgagggtgtcgcagctcgccttc
agcgccgacgagaactacctgatcctctccgccgagagcggaggcggtctcgcggtatac
gaggtcgaaagcctgctccagggtgccacgaaagctgcgttcgagcttgcgacgaacggc
gagacgctgagggcgctcttcccgaaccccacgatcgagaaggcggaactgtgcgccatt
gtgacgaataacggcaacctgcacatggcgaacctgaaggagaggtcagtcagtaacgtt
ctgaaggcacaggttagctgtataagctggagtacgaagggaaagcagctggtggccggc
ttggcggacgggaccattttccaaatgactcctgagggtgaagccaagggcgagatcccg
cggccaccaaacgtgtcggatgctcacgtatcttctctgacttggctggaaaatcacctg
tttctcgccatccacacatcaacttcggagtccccgccaagttcagtataccatctcatt
accagaaagctgccatcagatttcactttccagaagttgaatgaccccgtcgacccattt
ggcgccgaaaagccgcctcatcactcaatattgaggctcaaggaattccctcccaacctt
tcagatctcctcatcgtagcatcaaccgtctccccagacatcggccttctcagccgggcg
aaatcacccctgacttctgatcatccagtcgacaccgccggcgtctttaccacaacagaa
ttggccgatgactcgaaacgtgcctctctgcccatgaatgacagctacgagaacaccatc
cccatcggtgtcgcccttgatctctcagccaaggacaaggtatacaagcccttgcccgcc
gatgaggagattgaggattctccgggcccagtgccgggtttgtgggtgctgaacaatgag
ggtgtcctcagttcatggtggattatttacgaggactccatcaggcagggcacgacgtac
cctggtatggccgcgcttgatacttccgcgccccctgccggcgcatccacctcgacacca
gcagcagcaccggcaccggccccggcttcgaatacatcagcattcggcgctccttcgagc
accccagcctttggttcagcatccgcgttgggctcaggccaaaaggcctcaccgttcggt
tctagcggatccaagatccctacatttggtgggtcgtcagccctgggttctaaggcttca
ccatggggcgctgcgacgacgtcttccgccgcccccgcagcctctggttctacgtttggc
agcggtagcccctttggtggcagctcagctacatcaggctctccttttgctcaggcctcg
gcaacaaaatcagcgttcggcactggcggctctttcggaagcccttccgctacaactcca
gctgcaaacaagtcagcgtttggcagtggtagtacctttggggccccttccgctgcttca
tcaaatgcacccaagtcggcatttggtagcggaannnnnnnnnngttcgggactccctct
gctactccatcagatgcacccaagtcggcatttggtagcggaagcgcatttgggaccccc
tccgcgactccatcagctgcacccaagtcagcgttcggcagtggcagcgcctttgggaca
ccagctgcttcagcaggcccggcgtttggccagccttcatcagttggttttggtcagtcg
tcatcgcttggacagaagtcatctccatgggcctcaggcggagcatctggtgcgaacacg
tctgcgtcaccggcgttcggccagcccagcagcttcggaacatccgagaataagagtgtg
ttcggcggcggatcagcagctaaacctgcttctgcgtctggggggttctctagctttgct
agctctggtggctttggttctcttgggaataaggccaacgagggtgggagtgttttctcc
agtaagccttcatcaagtccattcggctctggaggtcaattgggcacggcttctaaggat
acagcgttccctccaccgagctcgactggcccagcgactagcaatcccttcagccagccc
ttcaaactggggaccactttcgaggcagatccctctgccaaggacgatgatgagaagcct
tctacccctggcggctcctctctatttggcagcaatttcggctctgcacttggaagcgcc
gtgacgaagactcctcccaaggaaacgaccacggaaccgaacgaagagacaccaaagccc
aaatcggtcttcagcctaggccaatccacaacgcctaaagaaactccagcgccttccaag
tttggtttcccaccgacttcaacatcagcccccaagagcggcttgtttggattcccttct
caaccagcaactggaggtttgtttggttctgcgaagccggcagagaagacacctgaggtc
aaggccgagtccagcactcctctgccccctgatacgacaagcaaaaactcatatcctctt
ggtgattcctcgtcttcttcgggcaccggaaatgttccttcagacggtggaagtaaggct
tcacctcaagtggacaatgcgcctctgcctcctgatttccttactacgccaaaggcaacg
tcaacgaaggcagccaacgctgctccgctaccaccggatttcctcaagccttcaaagcca
cagggaagcactaccccggccgacgaggctcctctcccacccgacttcctcacgcccaag
cctggcaagactgcagtgtccgccacgccttcggcggcgcttcctttgccagcagacgat
cagtcctcgcccgaggagcttgaacggccgaagtcgactgcacctgctgcggctcctgac
ttccttaagatgcccaagcaatctttatcgtcggcaacgtggtcgtctacccctcagaac
accacacctgcagtgaacgatgccccgttgccgccagacttcctcgctaagcccaaagag
cctgtcttcgcctccattccgactgtacctgatagtgagcatgacaccgatctggaagac
gaggatgacgatgatgagtctgagggcagcggcgtcattgtctccaaggatcaaagtcca
tccatgacagcgatgacccctacggcgggcatgaccccgcaaagctcgtttggtggcgtt
agcagcagcacctactcggtcccacggacagaggaagagagaccgcgggcatcgttgttt
ggcgacctgagccgcaatgctcccatgtttccccgaccgtcccaaaccagccctcgctct
cccagcccagtccgtggcgctgtgccaggccgcatcatgcgtcaggagtctgctcgttcg
gttagtgccccgggcatggcatctcagattcttgcggcccagaaaaagcagccttcgcaa
atggggtcatccattgtcgggaacaaatccaacgatgatcacttcattgctcagcaaaga
cttgcgcgccaaaggcggcaggccgaggagaccagggcactggaggacgaggaggacgat
gagattcagaagattcttgcctctaagatcgaacccacactaaagctggatgacttcatc
gcccactcaaacgttgtaccgtcagccaaggagaccatcccggcccaggtggaggcagtg
tatcgcgacatcaactcgatgatcgacacccttggtctgaatgctcgctctcttgccagc
tttctcatggggcacgacatcggattcaaagccggaggccgacacaagcaagacctcgag
aacccagatagctgggttctttgcgagattgatgagctcggagaagtcgttgacagatct
ttggctcaggacctcgaggatggtcgtgttcacgacgttgaagaaaagcttgaagcgtgc
aatgagctcgctcgcgagatgtctcgcctccgatcaaagcaagatgaccttaagaagatt
atcatggtgaagacggaccccgatcaagccgacatcagccgctctctgcctctgagcacc
gagcaggcaagtcagcagaacgagctgcgccgcgaatacacaaacttcaccaagcttctt
gccgaagccgaggaagccttgacgatcctgaagaccagaatcgccgccgcgaacagcgca
tctggaaagggcaactccaacatgcctaccgtcgaagccgtcatgcgaaccattggcaag
atgactagcatggtggagaagcgatccggcgacatcgacgtcctcgagaaccagatgcgc
aagctccgcttctcgtcggtcaacagccgcgagggctccccgatggtcacaccccagaga
aacagccgatccatcctcttctcgcccgagcgatcagccgtgatggcgtcgcccggcacc
ctgcgcaactccatggtgtcctccgtggcctcgtacggcggccgcggcggcacgggcacg
cctccgcgcaagaagctgagtgggttcagcggggaggagaagtcggagttgatggcgaag
cgggccaagcgccaggctgtgctgaacaagctcaaggctaatgtcgagagggcgggcgtg
agtgcgtgggcgatggaggatattgagtga
DBGET
integrated database retrieval system
