Colletotrichum fioriniae: CFIO01_12097
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Entry
CFIO01_12097 CDS
T04796
Name
(GenBank) RNA recognition domain-containing protein
KO
K14396
polyadenylate-binding protein 2
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CFIO01_12097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_12097
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CFIO01_12097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SCAR_helical
RBD_DEAH11
T4SS_LegC2C7
Nup35_RRM_2
DUF724
CCDC170_1st
RRM_occluded
V_ATPase_I
Med9
UPF0242
Motif
Other DBs
NCBI-ProteinID:
EXF80947
UniProt:
A0A010QLM8
LinkDB
All DBs
AA seq
198 aa
AA seq
DB search
MADVKPEDTPVEDHNVENNSVGEEDGHDEEEISAMKRRVAEMEEEAAKLREMQASLDQQS
RELSENKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVE
FTEPSLVAQALVLNESVFKGRNLKVVPKRTNIPGMSRGRGRGGGRGGRGGFGGRGGFPPR
GGYRGGYRGRGRGGFTPY
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcaagcccgaggatacccctgtggaggaccacaacgtcgagaacaacagc
gtcggcgaggaagatggccacgatgaggaggagatctctgcgatgaagaggcgggtagcc
gagatggaagaggaggccgccaagttgcgcgaaatgcaagccagcctcgaccaacagagc
cgggaactttcagagaacaaggaggacatcgacagccgcagtatctttgtcggcaacgtc
gactactctgcctcacccgaagagatccaagctcacttccagagctgtggctccatcaac
cgcgtcaccattttgttggacaagttcactggacagcccaagggatacgcctacgtcgag
ttcaccgagcccagcctcgtcgcccaggccctggtcctcaacgagagcgtcttcaagggc
cgcaacctcaaggtcgtccccaagcgcaccaacatccctggcatgtctcgcggtcgcggt
cgtggtggtgggagaggaggccgcggtggcttcggcggccgtggcggtttcccgcctcgc
ggtggctaccgtggaggctaccgcggccggggcagaggaggattcaccccttattag
DBGET
integrated database retrieval system
