Colletotrichum fioriniae: CFIO01_12609
Help
Entry
CFIO01_12609 CDS
T04796
Name
(GenBank) Rad4 transglutaminase-like domain-containing protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFIO01_12609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_12609
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CFIO01_12609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-ProteinID:
EXF76579
UniProt:
A0A010RFK9
LinkDB
All DBs
AA seq
1053 aa
AA seq
DB search
MPPHVPRKRLREESPVKQTPKRQRVTKGQGKTPASSGRRKPTLYDDLDATTTSESSKVGR
AALDTISDSDETSSLSDLSDGDFEDVPLANGRKAEEASDEDDNDDIEFEDVPAPRTTLAV
APTTSKDLQLTLDAGLGTAMTDPYGDKKGPTKREKKIRNVTHCIHVQYLLWHNAIRNSWI
SDQEVQAIMMSHVPPRLWEEVERWRRTSGLDTKPKQPPTKAAKSAKKTRGKGKGKKTEDE
DSRDWGAAAERLEAGAVDMSHGDPLFRLMRALVAWWRQRFRVTAPGIRKWGYMSPERLGR
LRKAWEREGKDEEKFGEQINGLEGFRKCAQECTGSRDVGSQLFTALMRALGLQARMVANL
QPVGFGWTKLEEADPEMEKNATSAPKSSDEASEAADGTRGKAKRGTKKTTTKNAPVKKTS
KQAPKAASGRKTGTRQASNKSAVIEIDDSDDELGLEHPDSDDASVVELAVTPRKSTAALK
KFDKDLEFPHYWTEVLSPVTKKYLPADPIVKNIVGTNRELVESLEPRGGKAEKAKQVMAY
VVGFSPDGTAKDVTVRYLRKQLWPGRTKGARMPLEKVPIYNRHGKVKRYGQFDWFKLAMK
GYAKGSRKHPLTEEDDVEDSTDLKPAQPEKKEVKEGSETMAYYKQSKEFCLERHMKREEA
LLPTAEPVKTFHHKGKGGEISPEPVYSRKDVVNVKSAETWHKQGRAPKPGEMPLKRVPYR
AATTNRRREIAEAEAASGEKVLQGLYSFEQTEWIIPPPIKDGIIPKNNYGNIDLFAEHMC
PEGAAHVPFRGAVKVCKRLAIDYAEAVVDFEFGNRMAVPVIQGVVIAEEYHDQVMEEIRK
DEAERARKEDEKRRKAALSMWSKFLKGLRIVERIRQDYGHVDDSVPVFQKHGAAKATKNA
HADEEEDKNQLDAEAMQMREEEMAGGFFPEGHDEEEVEQPKRFTSGFFPVVDENDEDEDM
DDALQVDHGHVEKSHAVNGSDGAEDAGNAEDQMEASPEPGPLPAPVKAKPKPKKKAVARR
SSRRRRRPISESEDEDEEEDDDDDFVASDDDYE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcatgtgccgcggaagcggttgcgcgaggagtcgccggtcaagcagaccccc
aaacgccaacgggtaaccaaagggcaagggaagactcccgccagctccggccgcagaaag
ccgactttgtacgacgatttggatgctaccaccacgtctgagtcatccaaggtcggccgc
gctgcgcttgatactatcagcgacagcgacgagaccagttccttaagcgatctatctgac
ggcgattttgaggatgtgcctcttgcaaacggtcgcaaggcggaggaagcgtctgacgaa
gacgataacgacgacatcgagtttgaggatgttcctgccccgaggaccaccttggcggta
gcaccgactacttctaaagacctacagctcacccttgacgccgggcttggcaccgctatg
actgatccctacggtgacaagaagggacccacgaagcgtgaaaagaaaattcgcaatgtg
acgcactgcattcacgttcagtaccttctctggcacaatgccatcaggaactcatggata
tccgaccaggaagtccaggcgatcatgatgtctcatgtgcctcctcgtttgtgggaagaa
gttgagcgatggagaaggaccagcggcttagacaccaagccaaagcaaccaccgaccaag
gcagccaaatcagcgaagaagaccagaggaaaggggaaaggaaagaaaaccgaagacgaa
gactctcgggactggggcgctgccgctgaaagactggaggcaggtgctgtcgatatgagc
catggcgatccactgttcagacttatgagggctctcgtggcgtggtggaggcaacgcttc
cgcgtcacggcacccgggattcgaaagtggggatatatgtcgcctgaacgacttggccgg
ttgcgaaaagcctgggagagggaagggaaagacgaggaaaagtttggagagcagatcaat
ggactcgaaggatttcggaaatgcgcccaggaatgcacaggaagtcgagatgtgggatcg
caacttttcaccgcgcttatgagggctttggggttacaggcacgcatggtcgcgaatctc
caaccagttgggttcggctggacgaagctggaggaggcagatcctgagatggaaaagaat
gcaacttcggcaccaaaaagcagtgacgaagcgagtgaggcggcagatggcacacgcggt
aaggcgaaaagaggaacgaagaagacgacgactaagaatgccccggtgaagaagacatca
aagcaggcaccaaaagcagcgtcaggacgaaaaactggcacgagacaagccagtaacaag
agcgccgtcattgagatagatgactcggatgatgagcttggcctggagcatccggacagc
gacgatgcgtcggtcgtagagttggcagtgaccccacgaaagtcaaccgcagcgttgaag
aagtttgacaaggacctggagtttccacattattggacggaagtactatcgccggtgacg
aagaaatatctgccagcggatccaatagtcaagaatattgtcggcactaatcgagaactg
gttgagtctctcgaaccacgtgggggcaaggcagaaaaagccaaacaagtcatggcatat
gttgttggattctctccggatggcacagccaaggacgtaacagttcgctatctacgaaaa
cagctgtggccaggtcgtacaaaaggggcgaggatgccactggaaaaggtaccgatttac
aacagacacgggaaggttaaacgatacggccaattcgactggttcaagttagctatgaag
ggctatgccaagggcagtcggaagcatccgctcaccgaggaggacgacgtcgaggattcg
acagatctgaaacccgcccaaccagagaagaaagaggtcaaggaaggtagcgaaactatg
gcgtactacaagcagtctaaggagttctgtctcgagcgtcacatgaagcgcgaggaggcc
ctgctacctacagcagagcctgtcaagacttttcaccacaaggggaagggcggagaaatc
tccccggaaccagtctactcgagaaaggacgtggtcaacgtcaagagcgcagagacatgg
cacaagcaaggcagggcaccgaaacctggtgaaatgcccctgaagagggtgccatatcga
gcggctacgaccaacagacgacgagagatcgcagaggccgaggctgccagcggcgaaaag
gttcttcaaggattgtacagctttgagcagacggagtggattattccgccgcctatcaaa
gatggaatcatcccaaagaacaattatggtaatatcgatctctttgccgagcacatgtgc
cctgaaggcgccgcacacgtcccgttccgaggagccgtcaaggtctgcaagaggctcgcc
atcgattatgccgaagccgttgtggactttgagtttggcaatcgaatggccgtcccagtc
attcaaggtgttgtcatagccgaggagtatcacgatcaggtcatggaagagatccgaaag
gacgaggcagagcgagcgcgcaaagaggacgagaagcgacgcaaagcagcgttgagcatg
tggagcaagttcttgaaaggcctcaggattgtcgagcgcattcgccaggactatggtcat
gtcgacgacagtgttcccgttttccagaaacatggggccgctaaggctaccaagaacgct
cacgccgacgaagaagaagacaagaaccagctggacgccgaagcgatgcagatgagagaa
gaggagatggcaggtggcttctttcccgaaggacacgacgaagaagaggtcgaacaaccc
aagcggtttacctctggctttttcccagtggtggatgagaacgacgaagatgaagatatg
gatgacgcgctgcaagtggatcacggtcatgttgagaagtcgcatgctgtcaacggctcg
gatggcgcggaagatgcgggaaatgcagaggatcagatggaagcttcacccgaacccgga
cctctacctgcaccagtgaaagccaaaccgaagcccaagaagaaggcagtggcgagacga
tcatctaggcgccggcggaggcccatatctgaaagcgaggacgaggacgaggaagaagat
gacgatgacgactttgtagcctcggacgatgattacgagtag
DBGET
integrated database retrieval system
