Colletotrichum fioriniae: CFIO01_12721
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Entry
CFIO01_12721 CDS
T04796
Name
(GenBank) helicase associated domain-containing protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_12721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfj03041
]
CFIO01_12721
03009 Ribosome biogenesis [BR:
cfj03009
]
CFIO01_12721
Enzymes [BR:
cfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CFIO01_12721
Spliceosome [BR:
cfj03041
]
Complex A
U2 snRNP components
U2 related factors
CFIO01_12721
Complex B
CFIO01_12721
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CFIO01_12721
Ribosome biogenesis [BR:
cfj03009
]
Eukaryotic type
90S particles
Helicases
CFIO01_12721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
HA2_N
SRP54
AAA_19
T2SSE
Flavi_DEAD
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
EXF80181
UniProt:
A0A010RIG3
LinkDB
All DBs
AA seq
780 aa
AA seq
DB search
MADFEDKGSKRLSADREGSRKKVKKEEEDESKYNPYLAHMKEENGVKSEEGTIDASSPFY
GFKQRATTSKQHEKIEDLDDNAFTGRPHSQKYFQILEARRDLPVTKQREEFLEKYHSTQI
LVFVGETGSGKTTQIPQYVVFDELPQLNRKMVACTQPRRVAAMSVAQRVADEMDVNLGEE
VGYSIRFEDRTSPNTILKYMTDGMLLREAIHDHEMSRYSCIILDEAHERTLATDILMALL
KQIAARRPDLKIVVMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAI
RTVLQIHASEGEGDILLFLTGEEEIEDACRKISLEADEMTREIDAGPLVVYPLYGTLPPH
QQQKIFDKAPAPYKKGGRPGRKVIVATNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVE
SLLVSPISKASAQQRAGRAGRTKPGKCFRLYTEQAFKKELIEQTHPEILRSNLANTVLEL
KKLGVQDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGSLASEFPLDPALAVM
LISSPEFYCSNEILSIVSLLSIPQIWVRPAAQRKRADEMKAQFSHPEGDHLTLLNAYHAF
KGTANQPDVDPKRWCHEHFLSFRHLSSADNVRAQLKRIMEKSDLELVSTPFEDKNYYTNI
RRALLSGFFMQVAMRESSGKVYRTIKDDQAVMMHPSTVLKTDYEWVLYNEFVLTSKQYIR
TCTGIRPEWLLEIAPVYYDIDTFDDGIVKTALTRASEKKRRKEAMKNGRNGNPKGPILTI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttcgaggataagggatcgaagcgcctgagcgccgacagagaaggaagcagg
aagaaggtcaagaaagaggaagaggacgagtccaagtacaacccctacttggcgcatatg
aaggaggagaacggcgtcaagtccgaagagggcaccattgacgccagctcgccgttttac
ggtttcaagcaacgcgccacaacttcgaagcagcacgagaagatcgaagacctcgacgac
aacgccttcactggccgtcctcactcgcaaaagtacttccagatcctggaagcgcgtcgc
gatcttcccgtcacgaagcaaagagaagagttcctcgagaagtaccactctacccaaatc
ctcgtcttcgtcggtgaaaccggttccggaaagacgacccagattccccaatatgtcgta
tttgacgagctccctcagctcaaccgcaagatggttgcctgcactcagcctcgtcgtgtt
gccgccatgtccgtcgcacagcgtgttgccgacgagatggacgttaatcttggcgaggag
gtcggatacagcattcgtttcgaggacagaaccagccccaacacgatcctcaagtacatg
accgacggtatgcttctccgagaagccatccacgaccacgagatgtcgcgttacagctgt
attattctcgacgaggcccacgaacgtactctcgctaccgatatcctgatggccctgctc
aagcagatcgccgcccgccgccccgacctcaagatcgtggtcatgtccgccactctcgat
gcgcaaaagttccagcgctacttcaacgatgcgccgcttctcgccgttcccggtcgtacg
caccccgtcgagattttctacacccccgagcccgagagggactatgtcgaggctgccatt
cgaacagtgttgcagattcatgcctccgaaggggagggcgatattctactgttcttgacc
ggcgaggaggagattgaggatgcttgccggaagatctctctcgaggccgatgagatgaca
cgagaaattgacgccggcccgttggtggtttacccgctctatggtactctgccacctcac
cagcagcaaaagatcttcgacaaggctccggctccgtacaagaagggcggccggccagga
cgcaaggtcattgtggctaccaatattgctgagacgtctttgaccattgacggtatcgtg
tatgtcgtcgatcccggcttcagcaagcaaaagatctacaacccgcgaatccgtgtcgag
tctcttttggtttctcctatctccaaggcctccgcccagcagcgtgctggtcgtgctggt
cgtacaaagcctggaaagtgcttccgtctctacaccgagcaggccttcaagaaggagctc
atcgagcagacacatcccgagattctgcgttccaacctggccaacacggtcttggaactg
aagaagcttggtgtccaggatctcgtccacttcgacctcatggacccgcctgcgccggag
accatgatgcgtgctcttgaggagctgaactatctcgcctgccttgatgacgatggtgag
ctgactaccctcggaagtctggcctccgagttccccttggacccagctttggctgtcatg
cttatctcctcgcccgagttctactgctccaacgagattttgtccatcgtgtctctcctc
tctattcctcagatctgggtccgccccgctgctcagcgtaagcgtgccgacgagatgaag
gcgcaattctcacaccccgagggcgatcatctcacgctcctcaacgcctaccacgccttc
aagggcacggcgaaccagcccgatgtggaccccaagaggtggtgtcacgagcacttcctc
tccttccgtcacctcagcagtgccgacaacgttcgtgcgcagctgaagcgcatcatggag
aagtctgacctcgagctcgtgtcgaccccctttgaggacaagaactactataccaacatc
cggcgcgcgctcctttcgggcttcttcatgcaggtcgccatgagagagagctccggcaag
gtttaccgtaccatcaaggacgatcaggcagtcatgatgcatccctccacggtcctcaag
accgactacgaatgggttctttacaacgaattcgtcctcacctccaagcagtacattcgt
acatgcaccggaatcaggccagagtggctacttgaaatcgcacccgtctactacgacatt
gacacgttcgacgatggaatcgtcaagaccgcgctgactcgggcctcggagaagaagcgc
agaaaggaggccatgaagaatggtcgaaacggcaacccaaagggcccaattctcacaatc
tga
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integrated database retrieval system
