Colletotrichum fioriniae: CFIO01_12736
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Entry
CFIO01_12736 CDS
T04796
Name
(GenBank) SWIRM domain-containing protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CFIO01_12736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfj03021
]
CFIO01_12736
03036 Chromosome and associated proteins [BR:
cfj03036
]
CFIO01_12736
Transcription machinery [BR:
cfj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CFIO01_12736
Chromosome and associated proteins [BR:
cfj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CFIO01_12736
PBAF complex
CFIO01_12736
GBAF(ncBAF) complex
CFIO01_12736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
DUF3439
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
EXF78849
UniProt:
A0A010RLM1
LinkDB
All DBs
AA seq
692 aa
AA seq
DB search
MEDQTNYGISNAASPGSNPILSQPPLQPAAPTPGDGAEDVQMTEGPVAEPSIKQDSATPA
PGVTSDNPLDAPEGPAPEATQDEEMGGARDETKDGQAAKGGDDAAAGNDAEGQDSKTKET
LESAAREHLISQTHAIVLPSYSTWFDMNTINDIERKAMSEFFNSRNRSKTPAVYKDYRDF
MINTYRLNPVEYLTVTACRRNLAGDVCAIMRVHSFLEQWGLINYQVDAEQRPSHVGPPFT
GHFKIICDTPRGLQPWQPSADAVVSAGKPSADTEKKAAATPVAKSELNLEVSRNIYEASA
KGTKLNKSEPKTNGETPVTNGVSGIEDATKTPIVKVNCHTCGIDCTRLYYHSSQADPNSK
TKYDVCPSCFLEGHLPGNQTSAQFTRMENPTYTTVLDRDAPWSDAEILRLLEGIERMDDD
WNEIADHVGTRTREECVLQFLSLDIEGKYADSDLAVNAPTGLAMLGQQGGHLPFSQADNP
VMSVVGFLAGLADPASTAAAANKSAEELTRKLRRRLEGGNAEEQAVTNGKGKDKDGDSME
IDIRQDVTTTTTTTTTTLATIPMATMGARAAGLVSHEEREMTRLVSAAANLTLQKLELKL
KYFNEMEAILQAERRELERGRQQLFLDRLAFKRRVREVQDGLKAAVETGGDQGLKQAQDA
MSDGANLTFQAAPGAGAVQPLSSGGQIKSFEA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaaaccaactacggaatttccaacgccgcctctcctggcagcaatcccatt
ctttcgcagccacctttgcaacctgctgcgcctaccccgggagatggagctgaagatgtc
cagatgaccgaaggcccggtcgctgagcctagcatcaagcaggacagcgcgacacctgca
ccaggcgtcacatccgacaatcccctcgacgcccccgaaggccccgcgcccgaggctacg
caggatgaggaaatgggcggtgctcgcgacgaaacaaaggatggccaagcagcaaagggc
ggcgatgatgctgcagctggaaacgatgctgaggggcaagactccaagaccaaggagacg
ctcgaatccgcggcccgagaacaccttatctcgcaaacgcacgctatcgttttgccgagc
tacagcacctggttcgacatgaacacaatcaacgacatcgagcgcaaggccatgtccgag
ttcttcaacagtcgcaaccgcagtaaaacaccagctgtatacaaggactaccgtgatttc
atgatcaacacctacaggttgaatcccgtggaataccttactgtcacggcctgcagacga
aacttggctggagacgtttgcgccatcatgcgcgtccactcattcctcgagcagtggggt
ttgattaactaccaggttgatgcggagcaacggccctcgcatgtcggcccccccttcact
ggtcacttcaagatcatttgcgacaccccacgtggtcttcagccgtggcagccatctgct
gacgccgtcgtctctgctggcaagcccagtgccgatacagaaaagaaggctgcggcaaca
ccggttgctaagagcgagctaaacttggaagtcagccgcaacatctacgaagcaagcgcc
aagggtacaaaactcaacaagagcgaaccgaagaccaatggcgaaacgccagtgacgaat
ggtgtttcgggtatcgaagatgctaccaagacacctattgtcaaggtcaactgtcacact
tgcggcatcgactgcaccaggctatactaccacagctctcaagccgatccgaattccaag
accaagtacgatgtttgcccaagttgcttcctcgagggtcacctcccaggcaaccagaca
agcgctcaattcacccgcatggaaaaccccacatacacgaccgtcctcgacagagacgca
ccgtggagtgatgccgagatccttcggttgcttgagggcattgagaggatggacgacgac
tggaatgagattgcggatcacgtgggtacgcgaacacgcgaggagtgcgtcttgcaattc
ttgtccttggacattgagggcaagtatgcggactcggacctcgccgtgaatgcgcccacc
ggccttgcaatgctcggacagcagggtggccatttgcctttcagccaggcggataacccg
gtcatgtccgttgtcggcttccttgccggcctcgcagaccctgccagtacggcggcggcg
gcgaacaagtctgccgaagagctcacgcgtaagcttcgcaggcgactcgagggtggcaac
gcggaggagcaagctgtgaccaatggtaagggcaaggacaaggacggcgactcaatggaa
attgacatccgccaagacgtcactacgacaactactacgacgacgacgacgttggccacc
attcccatggctaccatgggcgcccgggccgctggcctggtatcccatgaggaacgtgag
atgacaagactggtgtccgctgcggccaacctcactctgcagaagttggagttgaagttg
aagtacttcaacgagatggaggccatcttgcaagcagagagaagagagctcgagagagga
cgacaacagctgttcctggatcgcctcgcgttcaagcgtcgcgtccgcgaggtgcaggat
ggactcaaggcagcagtcgagacaggcggtgatcaaggtcttaagcaagcccaggatgcg
atgtctgacggagccaacctcaccttccaagcggcgcctggagcaggcgctgtgcagcct
ctgagcagtggagggcagattaagagcttcgaagcttga
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integrated database retrieval system
