Colletotrichum fioriniae: CFIO01_12777 Help Entry CFIO01_12777      CDS       T04796                                  Name (GenBank) helicase sen1   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism cfj  Colletotrichum fioriniae Brite KEGG Orthology (KO) [BR:cfj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cfj03021]     CFIO01_12777 Enzymes [BR:cfj01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      CFIO01_12777     5.6.2.5  RNA 5'-3' helicase      CFIO01_12777 Transcription machinery [BR:cfj03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      CFIO01_12777 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel UvrD-helicase AAA_19 AAA_30 Viral_helicase1 AAA_22 Motif Other DBs NCBI-ProteinID:  EXF76749 UniProt:  A0A010RG21 LinkDB All DBs AA seq 2084 aa AA seqDB search MESQPVEDILEQSYRKFTQIPPDFHLLCPKVDEDDFEDYDDLNNDGEDITALEKKERVEK WKERLDIAYWTSLLLAYGKDKAGVWLDAWGSRMAINLHNCDKCVLNWHMYRKKYLQIFSE KWPEEAVAGIENCLHRFDFDRIDKGLQWAKDIILKVENEGRAFARSDLGEEQGAVLLTVY EALCCMAYVSVPEKRTLFQFVFVRLSGKKPLKLGENVLLPAMTQFLFGEDKVRLQFAEKS WERLRPKSLTQEQFNWAIHDNLVVAIQSVSALNPRDPASLPEIERFWKAVNWIIKTLDEK LLLHGIRGMEIKPSIYDLLFVHMQCESEAILLLIIQALTVLLETSPQAFWDTIGDARPFV VIEQLLSQPLFKQLLAQSLTFAIKYDDGTGKNDSVESITTSWINTWIASLKRQQKGDACE QLLHLLFEQVIHDARIGEQGKAACIRAGLDALDHVLRSFLDPTIDVISGTTSVYINTILN VTLKYKDIINEGADTRSTDQHTLGVPKAAMSVISAALSLDSRVTAEEHLELRKATPKPIQ TAVTRKSADLWDGFLENLYEGKLLLAKTMLMAMAPLINVERFHPNRKEPEKLDPAKKSFN NRFHMVAEALGRVLQRMCEFTSPQLNELCLMAQSIRPIIAFTVHGEDEISSASAELIKLI TEQPSKEDALTVLLERNLSTTLSSMIFAIRRIMEPAHAAWGPARNIINTAKVVLSGLGDL SSGILRSKTLDSNEQIAVTGWWVAHWRYIEVAFTSTGNWSHLADIKVMQDFCRDVIELAD GMLAQDGLFASALQATTSQADVKQAKPKEEELTKMQQLLKDPQRHLFGIVRMLRLRDTYL VEVTVKVVAKLLTRLRENSIDIPSDSKNYVQDSCIKLTTTGRYPVTTNMNDQQRAELLKA LGEDDDIEIIQIQPVSKEKPKKQSFLDAWSKSGSSTPTSQAVRSNKDDVLELSSSVDKKR SILDQMAARQKASPAIPRIAVKPKLEPVVTQASKNALIESRKKAKLEKAKRDADEVARVR ALRGAANVGEGSGLKGLSGVVGKEHTTQKSQILVDSDEEEDDDSGDEDLNNLINKGQQGQ KAVDEAQRRRERALLEKTRGPVKKVKVQRSAKDMRARLIPPMDQLHQAILEWDIFHEGND PPSTSSSMAITRVASSYAHPQEYKQTFLGLLISEAWRSFVTAKDESTSKPYGLKIASRMN VDKFLEVTASIPKIESKERLLSEGDIILVSKSTDPLTDKSEAHALARIWKTTYKKERLEV TYRLNSKNNPLLAINALGVGAELQAVKITNMTTIEREYAALESLQYYDLMLEVLKAEPSP ILKYGDEAVKGVMQNYQLNPGQAKAILGAKDNDGFTLIQGPPGTGKTKTIVAMVGSLLTG NIQPPGTAIKPKLPTQGQAPMPKKLLVCAPSNAAVDELVLRLKQGVKTMTGSFHKINVLR LGRSDAINAAVRDVTLDELVKKKLEGDTTQNKAKEERDKMHNDAAKIRDELAELRPKLDE ARKNGDRNLSQALQRAFDQLKRAQINIGAKIDEDKTSGNTVSREAEIRRRQIQQEILDGA QVLCATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCTKCILVGDPKQLPP TVLSQSAARFGYDQSLFVRMQQNHPDHIHLLDRQYRMHPEISLFPSLEFYEGKLVDGEDM SALRRQPWHASALLGPYRFFDVEGTQSKGSKGRSLVNHSELKVAMQLYERFKTDFGRNYD VRGKIGIITPYKAQLQELKWQFSRRYGESITEDIEFNTTDAFQGRECEIIIFSCVRADPT GGIGFVKDIRRMNVGLTRAKSSLWILGDSRALVQGEFWNKLIDNAKQRSLYTKGDVMSML QKPSVLQALPPSPPKPAQKNDFDAEIVDQLQIKDVDMADVAPTAQPRKPSQPAQQPPTNY HVPERRPGSWEGNNRGEAHHSAARNSDRPPIIQSSTAKQESKKRPSDANEGQRGAKRMAT EQNRLPNRPPPTGPKAMVQAKEPKAPKPAKDPSAMVALGLTPAARPPAMETTASSSRTLP TNSSLPQNRNLPQRPPGQGGPNGPVIHRKKQKADPFIQRKPHKR NT seq 6255 nt NT seq  +upstreamnt  +downstreamnt atggagtcacaaccggtcgaggatatcctcgagcagagctatcggaagtttacccaaatt cctcccgacttccaccttctctgtcccaaggttgacgaggatgattttgaggactacgac gacctgaacaatgatggcgaagacatcacagctctagagaagaaggagagagtagaaaaa tggaaggagcggctggacatcgcctactggactagtcttctccttgcctatggcaaggat aaggccggtgtttggctcgacgcctggggcagccggatggctattaacctccataactgc gacaagtgcgtcctcaactggcacatgtatcggaagaagtatcttcagatcttttccgag aaatggccagaggaagccgtcgctggcatcgagaactgcctccaccgtttcgatttcgac cgaatcgataaaggtcttcaatgggccaaggacatcatcttgaaggttgagaatgagggc cgcgcctttgcgagaagcgacttgggtgaggaacagggcgcagttttgctcactgtttac gaggctctatgctgtatggcatacgtcagcgtgccggagaaaagaactctgttccagttt gtcttcgtccgcctctctggcaagaagccactgaagctgggtgaaaacgtcctgctccct gccatgacccagttcctctttggagaagacaaggtccgcctccaattcgctgaaaagtca tgggagcgcctccggccaaagtctttgacacaggagcaattcaactgggctatccacgac aacttggtggtagccattcagtcagtttcagcactcaatcccagggatcccgcatccctt ccggagatcgagcgtttctggaaagccgtcaactggatcatcaagaccttggacgagaag ctcttattgcacggaattcggggtatggagatcaagccgagcatctacgacttgctcttt gttcatatgcagtgcgagtcggaggcgatcctgctgctcatcatccaagcgttgactgtc ctgctcgaaacgtcaccacaggctttctgggacaccatcggtgacgcgcgaccattcgtc gtcattgagcagctcctctcccagcctttgttcaagcagcttcttgcgcaatctttgacc ttcgccatcaagtatgacgatggcacgggcaaaaatgactcggttgagtcaataacaact tcgtggatcaacacatggattgcctcactcaaacgtcagcaaaagggcgatgcttgcgaa cagctgcttcacctgcttttcgagcaagtcattcacgacgctagaatcggcgagcaagga aaggccgcttgtatcagggctggcttagacgctctagaccatgttctgcggtcgtttttg gaccctacaattgatgtcatctcaggcaccacatctgtctacatcaacacaattctcaac gtcactctcaagtacaaggatatcatcaacgaaggagcggatactagaagcacagatcaa cacacactcggtgtgcccaaagcagccatgagcgtcatcagtgccgccttgagcttggac tctagggtgaccgccgaggagcatctcgaactccgcaaggctacgcccaagccaattcag acggccgtcacccgcaaatcggcagacttgtgggacggatttctggaaaacctttacgaa ggcaagctcctcctagccaagaccatgctcatggccatggctcctctgatcaacgtggag agattccatcctaatagaaaggaacctgagaagttggacccggcaaagaagagcttcaac aaccgtttccacatggtcgcggaggcactcggacgcgttctacagcgaatgtgcgagttt acatcgccacaactcaacgagctgtgcctcatggcccagagcattcgacccatcattgct ttcacagtccacggcgaggacgaaatcagcagtgccagtgccgaacttatcaagttaatt accgaacagccttccaaggaagacgcactcaccgttctacttgaacgaaatctcagcacc actctctcttccatgattttcgcaataagaagaatcatggagcccgcacatgcggcatgg gggcccgctcgcaatatcatcaacaccgccaaagtcgtgctctcaggtctcggtgatctt tcgtctggcatcctaagatccaaaactttggacagcaatgaacagatcgccgtcactggc tggtgggttgcccattggagatatatcgaggtcgcgttcacatctaccggcaactggtct catcttgccgatatcaaagtgatgcaggacttttgtcgcgatgtcatcgagttggcagac ggcatgcttgcccaggatggtctgtttgcatcggcgctgcaagctactacctcgcaggcg gatgtcaagcaggcaaagccgaaagaggaagaactaaccaagatgcaacagcttctgaag gatcctcagcgtcatctctttggcattgtcaggatgcttcgcctgagggatacctatctt gtggaagtcacggtcaaggttgtggccaagttactgacgagactgcgcgagaattcaatc gacattcccagtgactccaaaaattacgtccaagactcctgcatcaagttaacgacaacc ggccgctacccagtcactaccaacatgaacgaccaacagcgtgccgagcttctgaaagct ctgggtgaagatgatgacattgaaatcatccagatccagccggtttctaaagagaagcca aagaaacagagtttcctcgatgcctggtccaagtctggttcttcaacaccaacatcccag gccgttcggtcaaacaaggacgacgttctcgagctcagcagttccgtcgacaagaaaaga tcaatcttggaccaaatggccgctcgtcagaaagcgtcgccagccattcctcgcatagcc gtcaagcccaagctcgagcccgtggtcactcaagcatcgaagaacgccctcattgagtcg cgcaagaaagccaaattggagaaagctaagagagatgccgatgaggttgcaagagttcgc gctctccggggagccgccaatgtgggtgaggggtcggggctgaagggacttagtggtgta gttggcaaagaacacacaacgcagaagagtcaaatcctggtcgacagcgacgaggaagag gatgatgattctggagatgaggatctcaacaacctcattaacaagggacaacaaggccaa aaggcagttgatgaagcccaaagacgtcgcgaacgggctttgctcgaaaagacgcgaggc ccagtcaagaaggtaaaggtacaacgttctgccaaggatatgcgtgcgcgtttgatcccc ccgatggatcaacttcatcaagccatcctggaatgggacatcttccacgagggcaatgat ccgccctcgacctcgtcctcaatggcgattacacgggttgcaagctcgtatgctcaccct caggagtacaagcagacctttttgggtctcctgatttctgaagcctggcgatcttttgtg actgccaaagatgagtcgacgtctaagccgtacggactgaagatcgcgtctcgtatgaat gttgataaattccttgaagtgactgccagcattcccaaaattgagagtaaggaaaggctg ctatcagagggcgacattattctggtgtcaaagagcactgatcctctaacggacaagtct gaagcccatgctctggcaagaatttggaaaacaacgtacaagaaggaaaggctggaagtg acataccgcttgaatagcaagaataaccccttgcttgccatcaatgccctcggtgttggc gctgaactccaagccgtcaagatcaccaacatgacgactattgagcgagagtatgcagcc cttgagagtctgcagtactacgacctcatgcttgaggtcctcaaagccgagccatcgccc attctgaagtacggagacgaggctgtcaagggcgttatgcagaactaccagctcaatcct ggtcaggccaaagccattctcggtgctaaggacaacgatggcttcaccttgattcaagga cctcccggtacgggtaagacgaagacaattgtggccatggtcggctcgctactcaccggc aacatccaaccccctggaacggctatcaagcccaagcttcctactcagggccaagctccc atgccgaagaagcttctggtatgcgctcccagtaacgcggctgtggatgagctggtgttg cgtctgaagcagggcgtcaagacgatgaccgggtctttccacaagatcaatgtgcttcgt ctgggaagaagcgacgcaataaacgctgccgtccgagacgtcactctcgatgagttggtc aagaagaaactcgaaggagacaccacgcagaacaaagccaaggaggaacgcgacaagatg cataacgacgcggccaaaatcagagacgaactggcggagcttcgacccaaactggacgag gcgcgcaaaaacggtgaccgcaatctttcgcaagccctgcagcgagctttcgatcagttg aagcgtgctcagattaacattggagccaagattgacgaggacaagacgagcggcaacaca gtcagtcgtgaagcagagattcgacgccggcaaatccagcaagagattcttgacggagct caagttctctgtgccacgctcagtggtagtggtcacgaaatgttcaagaacctcaacgtc gaatttgagacggtcatcatcgacgaggccgcgcagtgtgttgagctcagcgccctgatt ccattgaagtacggctgcaccaagtgtatccttgtcggtgacccgaagcagttgccaccc actgtgctttctcaatctgccgctagatttggatacgaccagagtctgttcgtccgaatg cagcaaaatcatcccgaccatatccatcttctcgaccgccaataccgcatgcaccccgag atcagcttattccccagcttggaattctacgaaggcaagcttgtggacggagaagatatg agcgcactccgtcgccagccttggcacgcaagcgccctccttggcccctaccggttcttt gatgtcgaaggtacccagtcgaagggcagcaagggtcgctctttggtcaatcactccgag ttgaaggttgccatgcagctttatgagcgattcaagacggatttcggacgaaactacgac gtgcgcggcaagattggtatcatcacaccgtataaagctcagttacaagaactcaagtgg caattctcgcgtcgttacggagagtcgatcaccgaggacattgagttcaacaccacagat gcctttcaaggtcgagagtgcgagatcatcatcttctcttgcgtccgagctgatcctacc ggcggtattggtttcgtcaaggacattagacgtatgaacgtcggtctcacccgcgccaaa tcctctctatggattttgggagattctagagccctggtgcagggagaattctggaacaag ctcatcgacaatgccaagcaaagatcactctacaccaagggagatgtcatgtcaatgttg cagaagccgagcgttctacaggcgctgcccccctcgccgccgaaacccgcgcagaagaat gactttgatgctgagatagtggaccagcttcagatcaaagatgttgacatggcagatgtg gcgcccacggcgcagccccgaaagccgtctcaaccggcccagcaaccacctacgaactac catgtcccggagcgtcgaccaggctcctgggaaggaaataaccgaggcgaagcacatcat tctgccgcccgaaactcggatcgaccaccaattattcaatcatctacggcgaagcaagag tccaagaagagaccatctgatgccaacgaaggacagcgtggcgcaaagaggatggcgacc gaacagaaccggctacccaacagaccgccaccgacgggacccaaagccatggtccaggcc aaggagccgaaggcaccgaagccggcgaaggacccttctgccatggtagccctcggtctg acaccagctgcacgaccgccggcgatggagacgacggcatcgtcttcgaggacgttgcct accaactcttcacttccgcagaaccgtaatttgccacagagacctcctggacagggtgga ccaaacggaccagtcatccacaggaagaaacagaaggcagatcccttcattcagaggaag cctcacaaacgttag

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