Colletotrichum fioriniae: CFIO01_12840
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Entry
CFIO01_12840 CDS
T04796
Name
(GenBank) 3' exoribonuclease family protein
KO
K03678
exosome complex component RRP45
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFIO01_12840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_12840
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CFIO01_12840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
EXF80343
UniProt:
A0A010S6R5
LinkDB
All DBs
AA seq
298 aa
AA seq
DB search
MPREAEPSANEKAFVTQALKENLRLDGREFDQYRKVQLTFGDEYGVANVELGKTRVLVKV
SAEVTVPYPDRPFEGVFQITTELSPMASPAFEVNRPTEAEVLLSRLLEKTVRRSGALDTE
SLCLVAGKKVWSVRADVHVLSHDGNLTDAACLAVVAALRHFRKPDTSNEGESLTIFTPAE
REPVPLSWLHSPFCVTFSFYGDEGEITLVDANWLEEQLRTSSVTVSLNKHGEISQISKLG
GTPVEAVTLLHCGNVALQKAKEFSTIVDERLADDAKRRDKGGLISELLSAENDRVVDA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccagggaagccgagccgtcagcgaatgaaaaggcctttgtcacacaagctcttaag
gagaacttgagacttgatggccgggaattcgatcaatatcgaaaagtccagctcactttt
ggcgatgaatatggagtggccaacgttgaactcggcaagacgagagtcctcgtcaaagtc
tccgcagaagtgacggtcccctacccagaccgcccctttgagggcgtcttccaaatcacc
accgagctcagccccatggcctccccagccttcgaggtcaaccgcccaaccgaggccgag
gtcctcctctcccgcctcctcgagaagacggtccgccgctcgggcgccctcgacacggaa
tccctctgcctcgtcgccggcaaaaaggtatggtccgtccgcgccgacgtccacgtgctc
tcccacgacggcaacctcaccgacgcggcctgcctcgccgtcgtcgccgccctgcgccac
ttccgcaagcccgacacctccaacgagggcgagagcctcacaatcttcacgcccgccgag
cgcgaacccgtgcccctgagctggctgcacagccccttttgcgtgacgtttagcttctac
ggagacgagggcgagattacgctcgtcgacgcaaactggctcgaggagcagctgcggacg
agcagtgtgacggtcagcctgaacaagcacggcgagattagccagatttccaagttggga
ggcacgcccgtcgaggcggtgacgctgctgcactgcggcaacgtggcgttgcagaaggcg
aaggagttctcgacgatagtggacgagaggttggcggacgacgcgaagcggagggacaag
ggcggtctcatatcagagcttctgtcggcggagaatgacagagtggtggacgcatag
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