Colletotrichum fioriniae: CFIO01_13010
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Entry
CFIO01_13010 CDS
T04796
Name
(GenBank) WD domain-containing protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfj03009
]
CFIO01_13010
Ribosome biogenesis [BR:
cfj03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
CFIO01_13010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
NBCH_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_TEP1_C
WDR55
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR54
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-ProteinID:
EXF84356
UniProt:
A0A010RUX2
LinkDB
All DBs
AA seq
440 aa
AA seq
DB search
MLSEEFYSCICGPPIAANTAVSKDIGIYAHTLSPSYTVKSTLKRSATPAHCLAVSDSHVF
AAQHEKSQVHVYSRSRGIQETVVTFPERIRSLALIDDVLALGTSEGRLILWETCTGRQLV
TPPCHVQAVSCLAVTPYHILTGSEDSNIHVWTISRLLELDASVESEPDRTLSNHRAAITS
LAVSGSVNPETNICVSSSKDKTCIIWNYQTGDVLRTLLFPTAPLCVSMDPCGRAVFVSSE
DRALYLVELFGEKPLIGPNSTESSSTVVQVNSPIGVADEDAGSALCLAPNHDGTTILSGH
AKGKILQWQLAENGHPTELTDLNASVTNLVFPPLLQTPRPTKAVAVVKPTQTERQLTFTS
QLNTSLEQETRFGKMLNGFGLPDDALEAAILSFQESHAQQSATDEEAQQGTEVLWDIINE
QRALHKLTMQTYHEAKSSHT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcggaggaattctactcctgtatttgcggcccgcctattgcggcaaacacggcc
gtgtccaaagatattggcatctacgcccatactcttagccccagctacactgtcaagtca
actctcaagagaagtgctaccccggcccactgcctggctgtcagtgactcgcatgtcttt
gccgcccagcacgaaaagtcccaggtccacgtctactcgagatcgcggggcatccaagaa
acagtcgttaccttcccagagcggattcggagcttggcgttgattgacgatgtcttggcg
ttaggcacctccgagggcaggctgatcttgtgggagacatgcaccggtcgccagctggtc
acaccaccttgccacgtccaggccgtttcgtgtctggccgtcacgccctatcatatcctc
acaggctccgaagactctaacattcatgtttggacaatctcgcgtctgctggagctggac
gcttcggtggagagcgagccagaccgtacgctctccaaccacagggctgccatcacatcg
ctcgctgtcagcggcagtgtcaacccggaaaccaacatctgcgtctcgtccagcaaagac
aagacctgcatcatctggaactatcaaacgggcgatgttctgcgtacactattgttcccc
acggctccgctgtgcgtttccatggatccctgcggtcgtgccgtcttcgtttcatctgag
gacagggctctctacctcgtagagctcttcggtgagaagccgctcattggtccgaatagc
actgaatcatcgtcgactgtcgtccaagtaaattcaccgattggagtcgctgatgaagat
gctggctcggccttgtgcttggcaccaaaccatgatggcacaacaatcttatccggtcac
gcaaaaggcaaaatcctgcaatggcaactggccgaaaacgggcaccccacagagttgaca
gatctcaatgcctctgtgacgaacttggtgtttccgccattgctgcaaacacctcgaccc
acaaaagctgttgcagttgtcaagcccactcagaccgagcggcaactcaccttcacatct
caactaaacacaagtctcgaacaagagacgagattcggcaagatgctcaatggctttggc
ttgcctgatgatgcgcttgaggccgccattctttcgttccaggagtctcatgcacaacaa
agtgccacggatgaagaggctcagcaggggactgaagtgttgtgggatattatcaacgag
caacgggcgctacataagctgactatgcagacgtaccacgaagccaaatcatctcatacc
tga
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