Colletotrichum fioriniae: CFIO01_13166
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Entry
CFIO01_13166 CDS
T04796
Name
(GenBank) SAM domain-containing protein
KO
K27407
RNA-binding protein VTS1
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_13166
04131 Membrane trafficking [BR:
cfj04131
]
CFIO01_13166
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CFIO01_13166
Membrane trafficking [BR:
cfj04131
]
SNARE
SNARE associated proteins
Others
CFIO01_13166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-ProteinID:
EXF85441
UniProt:
A0A010RY04
LinkDB
All DBs
AA seq
609 aa
AA seq
DB search
MSGSHIAGNRNSTPEANTNPSLRPPSSRVMGANSHLRASADMAALSNASPSSRIRPSSDF
YGSQQGQGHSNPETDPQDKIAQQWIADIDQYETTLEEMAAATLDQDFKDELSAIEQWFRV
LSEAERTAALYALLQQTTQVQIRFFIQVLQQMGKNHPMSGVLSPANFDKDPMSNRLSDAM
NKLNVDSSRNSLARPTSTATGKRQSGLDPSTINAMFPDAAAAIATEKAKFTQQTGNPPSS
NRNSAVGDSRQSMAAPTIAGPADNHDANGQNQWTGGDQSVQGSKAPGGQPPMGQFVQPPP
SSGLRSPRPPQISGNQNIQNTTLTTNDKPADLPLLSPYNPSGGNWASMVNTPLVANFNAN
TSGTQADMVANATAMKLAALSTVNNRFALDDVRKYRRARSNDAPGAPGQQGLPQNAQIPN
TNVVMINEHGQVLSRDQMIALQAQNMGFGQHRSRPSSPGIAMQPGGFGPMAFASPQNNGF
LSAYDGASPLLNNGIPSVNVGQLGVGNHEGYLSDHSDMVRGRSPRGRRGSSKPPEDPTDP
TLLQDIPSWLRSLRLHKYTENLKDMKWHELIELDDKALEDRGVNALGARRKMLKVFEQVK
EAKNDGKIA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagccacattgcgggaaaccgcaatagcaccccagaggccaacacaaacccg
tctcttcgccccccctcctcgagagttatgggagccaacagccaccttcgagcttctgcc
gacatggctgcgctctccaacgcatctccctcaagccggatccgcccgtcgtctgacttt
tacggctctcagcagggtcaaggccatagtaatcccgagaccgatccccaagacaagatc
gcccaacagtggattgccgatatcgatcagtatgagacgactttggaagaaatggccgct
gctaccctcgaccaggacttcaaggacgaactgagtgctattgagcagtggttcagggtc
ctcagcgaggccgagcgcactgctgctctgtacgccttgctgcagcagaccacccaagtg
cagattcgattcttcattcaggttctacagcaaatgggcaagaaccatcccatgtcgggc
gtcttgtccccggctaacttcgacaaagatccaatgtcgaaccgcctgagcgacgccatg
aacaagctgaatgttgattcgtcccggaactccctcgcccgccccacgagcactgcgacc
ggcaaacggcaatcgggactcgacccttccaccattaacgcaatgtttcctgacgccgcc
gcagccattgcgaccgagaaggccaagttcacccagcagacgggcaaccctccctcatcc
aaccggaacagcgctgtgggtgattctcgtcagtctatggctgctccaacaatcgcgggt
cctgccgacaaccacgacgccaatggccaaaaccagtggactggaggcgatcagtcggtt
cagggatctaaagctccgggcggccaacccccaatgggtcagtttgtccagccgcccccg
tcgagtggtttgagatctcctcgcccgccccagatctcgggcaaccagaatattcaaaat
accactttgacgaccaatgacaagccggcagaccttcctctcttgtccccgtacaacccg
agtggtggcaactgggcgtcgatggtcaatactccgctcgtggcgaatttcaacgccaat
accagcggcacgcaggccgacatggtcgcaaatgccaccgcgatgaaactagcagctttg
tcgaccgtcaacaaccgtttcgctctcgatgatgttcgcaagtatcgccgtgcccgatcc
aacgatgccccaggtgctccaggccagcagggtctgcctcagaatgcgcagattcccaac
accaatgtggtcatgatcaacgagcatggccaggtgcttagtcgcgatcagatgattgct
ttgcaggcacaaaacatggggtttggacaacatcgatctcggcccagctcgcctggcatt
gcaatgcagcctggaggcttcgggcctatggctttcgcttctccgcaaaacaatggcttc
ctcagcgcctatgatggcgcctctcctcttctcaacaatggcattccttcagtcaatgtg
ggccagttgggagtaggaaatcacgaaggttacctttcagaccactccgatatggtccgt
ggccgatctccccgaggtcgtcggggtagctcaaagccacctgaagacccaacagacccg
acccttcttcaggatattcccagctggcttagaagcttgcggttgcacaagtacaccgaa
aatctcaaagacatgaagtggcatgaattaattgagctcgacgacaaggctttggaagat
cgtggagttaacgctctcggagctcggcggaagatgctcaaggttttcgagcaagtgaag
gaggccaaaaacgatggcaagattgcttga
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