Corynebacterium frankenforstense: CFRA_00660
Help
Entry
CFRA_00660 CDS
T04872
Name
(GenBank) helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
cfk
Corynebacterium frankenforstense
Brite
KEGG Orthology (KO) [BR:
cfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfk03019
]
CFRA_00660
Enzymes [BR:
cfk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CFRA_00660
Messenger RNA biogenesis [BR:
cfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CFRA_00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_11
HA2_N
nSTAND3
AAA_19
Flavi_DEAD
ResIII
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
APT88050
UniProt:
A0A1L7CQC9
LinkDB
All DBs
Position
complement(155452..157959)
Genome browser
AA seq
835 aa
AA seq
DB search
MNIPASPFDLDAIGAGLPVTGALPEIAEALEAHHRAVVEAPPGTGKTTLVPPLVADLLAR
RAGDADAEAADTAAAGTGTAPLKTIVTAPRRVAVRAAARRLHHLSGNARAVGHRVRGDSQ
AGSAVEFVTPAVLVRMLLSDPELPEVGAVVIDEVHERELDTDLALAFSAELAALREDLDL
VVMSATLDTTRFSELLGEAPVVSTPAVTHPLETSYHPHPGRMAADRRSRDAFWAHLAALA
DAAVEKSGHSALVFVPGAREVEQTVAACRTRALPLHGRLERAAQDAALDGTGPARVVVST
AVAESSVTVPGVRTVVDSGLSRVPRRDSGRGMSGLVTVSEARSTAEQRAGRAGREGPGTV
LRAFTSDDLRHFDAHVTPEIDTADLTQAALWMACWGTPRGEGLALVSEPQPAAIAAAEET
LRALHAVDAEGRPTELGRRLADLPLDPRLGRALLTAGPSAAEVLAALSDGASGDLGRASA
PSREVARLRAVGARGAGGAAADAGDTAHRKKGGDRRGATSASDGVAVGLAFPERIARREG
GGEYLLASGTRAVLPGDTGLSGAEWLAVGEVTRSGTPGRAGRAGATIRSAARIDEADALE
IIGVTEELRADFADGKLRGRAVRRAGAIELAVTPTTVPPERAAEAVAAAVREEGTGMFRL
GEKAAALRDRLAFLHERVGEPWPDPETAEPEVWLAPEIQKAARGTPPGKIDLFDALQRLL
PWPEATRMDELAPQRLEVPSGSHPRVDYSTGRPVVRVKLQECFGLAESPRCAGVPVQFRL
LSPAGRDLAVTDDLESFWSGPYAQVRAEMRGRYPKHPWPEDPWSATATARTKKRM
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccccgccagccccttcgatctcgacgccatcggcgcaggtctgcccgtcacc
ggcgcgctgccggagatcgccgaggccctcgaggcccaccaccgcgccgtggtcgaggcc
ccgcccggcaccggtaagaccacgctggtcccgccgctggtcgccgacctgctcgcccgc
cgcgccggggacgccgacgccgaggccgcggacaccgcggccgccgggaccggcaccgcc
ccgctcaagaccatcgtcaccgccccgcggcgcgtggccgtgcgcgccgccgcccgccgt
ctgcaccacctctccggcaacgccagggcggtcggccaccgcgtgcgcggcgactcgcag
gccggctcggccgtcgagttcgtcaccccggcggtgctggtgcgcatgctgctctccgac
cccgagctgcccgaggtcggcgccgtggtcatcgacgaggtccacgagcgcgagctcgac
accgacctcgcgctggccttctccgcggagctggccgccctgcgcgaggacctcgacctg
gtcgtcatgtccgccaccctggacaccacgcgcttctccgagctgctcggcgaggccccg
gtcgtctccaccccggcggtgacccacccgctcgagaccagctaccacccgcaccccggg
cgcatggccgccgaccggcgctcccgcgacgccttctgggcccacctggccgctctggcg
gacgcggccgtcgagaagtccgggcactccgcgctggtcttcgtgcccggcgcccgcgag
gtcgagcagaccgtcgccgcctgccgcacccgggcgctgcccctgcacggccgcctcgag
cgcgccgcccaggacgccgccctcgacggcaccggccctgcgcgcgtggtcgtctccacc
gccgtcgccgagtcctcggtgaccgtgcccggggtgcgcaccgtcgtcgactcggggctg
tcgcgtgtgccgcgccgcgactccgggcgcggcatgtccgggctggtcacggtctcggag
gcgcgctcgacggccgagcagcgcgccggccgcgccgggcgtgagggccccggcaccgtg
ctgcgcgccttcacctccgacgacctgcgccacttcgacgcccacgtcaccccggagatc
gacaccgccgacctgacccaggccgcgctctggatggcctgctggggcaccccgcgcggc
gagggcctcgccctggtcagcgagccgcagccggccgcgatcgccgccgccgaggagacc
ctgcgcgccctgcacgccgtcgacgccgagggccggcccaccgagctcggccgccggctc
gccgacctgccgctcgacccgcgcctgggccgtgcgctgctgaccgccgggccgtcggcg
gccgaggtgctcgccgcgctttccgacggcgcgtcgggcgacctggggcgcgcgagcgca
ccgtcgcgggaggtcgcccgcctgcgcgccgtcggcgcgcggggcgccggcggcgcagcc
gccgacgccggggataccgcccaccgcaagaagggcggcgacaggcgcggcgcgacgtcg
gcaagcgacggggtggccgtgggcctggccttccccgagcgcatcgcccgccgcgagggc
ggcggggagtacctgctggcctcgggaacccgggcggtgctgcccggggacaccgggctg
agcggggcggagtggctggccgtcggcgaggtcacccgatcgggtacaccggggcgggcc
gggcgggccggcgcgacgatccgctcggcggcgcgcatcgacgaggccgacgccctggag
atcatcggggtgaccgaggagctgcgcgccgacttcgccgacgggaagctgcgcgggcgg
gcggtgcgccgggccggggccatcgagctcgcggtcaccccgaccaccgtgccgccggag
cgggccgccgaggccgtcgccgccgcggtgcgcgaggagggcaccggcatgttccgcctc
ggcgagaaggccgccgcgctgcgcgaccggctggcgttcctgcacgagcgggtcggcgag
ccgtggcccgacccggagaccgcggagccggaggtgtggctggccccggagatccagaag
gccgcccgcggcaccccgccggggaagatcgacctcttcgacgccctgcagcgtctgctg
ccctggcccgaggcgacccgcatggacgagctcgcaccccagcgcctcgaggtgcccagc
ggctcgcacccgcgggtggactactccaccggccggcccgtggtgcgcgtcaagctgcag
gagtgcttcgggctggcggagtcgccccggtgcgccggggtgcccgtgcagttccggctg
ctctcgccggccgggcgcgacctggccgtcaccgacgacctggagagcttctggtccggg
ccctacgcgcaggtgcgcgccgagatgcgcgggcgctacccgaagcacccgtggccggag
gacccgtggtctgcgacggcgaccgcgcgcacgaagaagcggatgtga
DBGET
integrated database retrieval system
