Corynebacterium frankenforstense: CFRA_02220
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Entry
CFRA_02220 CDS
T04872
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cfk
Corynebacterium frankenforstense
Pathway
cfk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFRA_02220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfk03021
]
CFRA_02220
03400 DNA repair and recombination proteins [BR:
cfk03400
]
CFRA_02220
Enzymes [BR:
cfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFRA_02220
Transcription machinery [BR:
cfk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFRA_02220
DNA repair and recombination proteins [BR:
cfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFRA_02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
APT88285
UniProt:
A0A1L7CQZ9
LinkDB
All DBs
Position
508286..509296
Genome browser
AA seq
336 aa
AA seq
DB search
MLISQRPSLTEEYIDESRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVKIEGVL
HEFTTIAGVKEDVSDVILNIKSMVLSSDSDEPVVMYLSKQGPGEVTAGDIEPPAGVEIHN
PDLHIASLNEQGSLDIEFVVERGRGYVPAAQTAGEIGRIPVDQIYSPVLKVSYKVEATRV
EQRTDFDKLVIDVETKNSITARDAMASAGGTLVELFGLARELNEQAEGIEIGPSPQESES
LAAYSMPIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLDIRNFGQKSINEVKIKLAG
LGLTLKDAPEDFDPTQLEGYDAETGGFVDDEAEDEE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcagcgaccgtccctcaccgaggagtacatcgacgagtcgcgctcccgg
ttcgtcatcgagccgctggagcccggcttcggctacaccctcggcaactcgctgcgtcgc
accctgctgtcgtccatcccgggcgcggcggtgaccagcgtcaagatcgagggtgtgctc
cacgagttcaccaccatcgccggtgtcaaggaggacgtctcggacgtcatcctgaacatc
aagtccatggtgctgtcctcggactccgacgagcccgtcgtgatgtacctgagcaagcag
ggcccgggcgaggtcaccgccggcgacattgagccgccggccggtgtcgagatccacaac
ccggacctgcacatcgcctcgctcaacgagcagggcagcctggacatcgagttcgtggtc
gagcgcggccgcggctacgtcccggcggcccagaccgccggcgagatcggccgtatcccg
gtcgaccagatctactcgccggtgctcaaggtcagctacaaggtcgaggcgacccgcgtc
gagcagcgcaccgacttcgacaagctggtcatcgacgtggagacgaagaactccatcacc
gcccgcgacgccatggcgtccgccggcggcaccctcgtcgagctgttcgggctcgcccgc
gagctcaacgagcaggccgagggcatcgagatcgggccctccccgcaggagtccgagtcg
ctggccgcctacagcatgccgatcgaggacctgaacttctccgtccggtcctacaactgc
ctgaagcgccaggagatccacaccgtcggtgagctcgccgagtgcaccgagtcggacctg
ctggacatccgcaacttcgggcagaagtcgatcaacgaggtcaagatcaagctggccggc
cttgggctcacgctcaaggacgcgccggaggacttcgaccccacgcagctggagggctac
gacgccgagaccggtggattcgtggacgacgaggccgaggacgaagagtag
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