Corynebacterium frankenforstense: CFRA_03120
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Entry
CFRA_03120 CDS
T04872
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfk
Corynebacterium frankenforstense
Pathway
cfk03420
Nucleotide excision repair
cfk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFRA_03120
03430 Mismatch repair
CFRA_03120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfk03400
]
CFRA_03120
Enzymes [BR:
cfk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFRA_03120
DNA repair and recombination proteins [BR:
cfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFRA_03120
MMR (mismatch excision repair)
Other MMR factors
CFRA_03120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
APT88435
UniProt:
A0A1L7CRF4
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All DBs
Position
710170..713763
Genome browser
AA seq
1197 aa
AA seq
DB search
MPESSTQNRISPKTLAALLGQPSPTPQQAAVTGAGPGPLLVVAGAGAGKTATMAARVVWL
VANGLAEPDQVLGLTFTRKAAQQLGHKIRGQLAELAGSPRLREVDPSGRLADRLADAAPT
ASTYDSFAGSIIREFGLLLPVEPTARIIGKTELFTIASQLVEDYTGVLETTVSTGEVVER
VLALNAEMDNHQADPEDVADEARAFIANVTDLPKAPRQRDALNKDMQKWVDAQRMRIDLL
PLVTALRAELRERSLTTFPQQMSQAARLAATRPKVRAALRRRYRVVMLDEYQDTSHSQRV
LLRSLFGADPAAEPAQAPVPVTGPADAPVAGPDATAPDASSPAPAPQAPALTVDAVGDPM
QAIYGWRGATAANLLAFREDFPEGTRPAPKAELTVSFRNPARVLAAANAVSDSVLGSAEA
TERPVAPLEPFGDEPGGVSLGWYETIAEERAAVAEKLAAHYRAAADASERFTGAVLVRKN
AQAAPIAAELEARGVPVEIVGVGGLLDVPEVADVVAVATMLVRPEDNAAALRVLSGPMVG
LSVKDLQALDGRARQLARRSRPAPAGEESTETAGTPDVTGTSDAGGTGTSDVAAAATGDS
TTPASSAAWADLLAEIDEALPPDAEQVVGLADAVADLGEGAGLSEEGARRLARLSATLRA
LRTRSLGKPLPELFADIESATGVRTEALAREDPGADGAPGTAHLDRLGAEVAAFAAVPGA
TLPRLLDYFRLARDHEAGLAPGEVSVRADRVQILTVHKAKGLEWRHVAVVHADDRTWKAT
PETFLTRPHTLPPELRGDADETVQFAPDAENRKEFETGAKAFIEEVRATEAQEATRLFYV
AVTRAERTLTVTGSALNDTASRPAAAYGMLELLAGHAPDAVETWFDPAAEPAGDTDGTAA
DTDGAAAATGDAAAAQAAANRTTATQEATPGDGTSASEAPALFPAVDADAAVRAGAEQVR
AARGELPAAADDELSTQWEADATALIEERRALDAPDVEVELSGRLTASDLVNLGRDPDAF
ARRQRRPVPFKPNSYAKRGTAFHSWLEERFGGQSLIDEDQLPGLGEEEVAPAELAHLKER
FLESAWAERTPQLVEHPFELAVGGSVVRGRMDAVFRDPEGGWIIVDWKTGAPPRGADLRA
AAVQLAVYREAFRELLAARGRGDEPVRAAFHYVAAGYTLEPADLPGRAELEALLDVD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagtccagcacgcagaaccggatcagcccgaagaccctggccgccctgctcggc
cagccctcgcccacgccccagcaggccgcggtgaccggcgcgggccccggcccgctgctc
gtcgtcgccggcgccggtgcgggcaagacggccaccatggccgcccgtgtcgtctggctg
gtggccaacggcctggccgaacccgaccaggtcctcggcctgaccttcacccgcaaggcc
gcccagcagctcggccacaagatccgcggccagctcgccgagctcgccggcagcccccgg
ttgcgcgaggtcgacccgagcgggaggctcgccgaccggctggccgacgctgcgcccacg
gccagcacctacgactctttcgcgggttccatcatccgcgagttcgggctcctgctgccg
gtcgagccgaccgcgcgcatcatcggcaagacggaattgttcacgatcgcctcgcagctc
gtcgaggactacaccggggtgctcgagacgacggtgagcaccggtgaggtcgtcgagcgc
gtgctcgccctcaacgccgagatggacaaccaccaggcggacccggaggacgtcgcggac
gaggcgcgcgccttcatcgccaacgtcaccgacctgcccaaggccccgcgccagcgcgac
gcgttgaacaaggacatgcagaagtgggtcgacgcccagcgcatgcgcatcgacttgctg
ccgctggtgaccgcactgcgcgccgagctgcgcgagcgctcgctgacgaccttcccgcag
cagatgagccaggcggcgcgcctggcggccacccgcccgaaggtccgcgccgcgttgcgc
cgccgctaccgggtggtcatgctcgacgagtaccaggacacctcgcactcccagcgcgtg
ctgctgcgctccctcttcggcgccgacccggccgcggagcccgcccaggcgcccgttccc
gtcacaggcccggccgatgccccagtcgcgggtccggacgccaccgcgcccgacgcctcc
tcgccggccccggccccgcaggccccggcgctgaccgtcgacgccgtcggcgacccgatg
caggccatctacggctggcgcggcgcgaccgccgccaacctgctggccttccgcgaggac
ttccccgagggcacccggcccgccccgaaggccgagctgaccgtcagcttccgcaacccc
gcccgcgtgctcgccgccgccaacgccgtctccgacagcgtgctcggctccgccgaggcc
accgagcgccccgtcgccccgctcgagcccttcggcgacgagcccggcggggtgtccctg
ggctggtacgagacgatcgccgaggagcgcgccgccgtcgcggagaagctcgccgcgcac
taccgcgccgcagccgacgccagcgagcggttcaccggcgcggtgctcgtgcgcaagaac
gcccaggccgcgcccatcgccgccgagctggaggcgcgcggggtgcccgtggagatcgtc
ggcgtgggcgggcttctcgacgtcccggaggtcgccgacgtcgtcgccgtggcgacgatg
ctggtgcgccccgaggacaacgccgcggccctgcgcgtgctctccgggccgatggtcggg
ctctccgtcaaggacctgcaggccctcgacggccgcgcccgccagctggcgcggcgctcc
cggccggccccggcgggggaggagtccacggagaccgccgggaccccggacgtcactggt
acctcggacgccggcgggaccggtacctcggacgtcgccgcggccgccaccggggactcc
acgacgcctgcctcgagcgcggcctgggccgacctgctcgccgagatcgacgaggcgctg
cccccggacgccgagcaggtcgtcggcctggccgacgccgtcgccgacctcggcgagggc
gcggggctcagcgaggagggcgcccggcggctcgcccggctctccgccaccctgcgcgcc
ctgcgcacccgctcgctgggcaagcccctgccggagctcttcgccgacatcgagtccgcc
accggggtgcgcaccgaggcgctcgcccgcgaggacccgggtgccgacggcgcgccgggc
accgcccacctcgaccggctcggcgcggaggtcgccgccttcgccgccgtgcccggggcc
accctgccccgcctgctggactacttccggctcgcccgcgaccacgaggccggcctggcg
ccgggcgaggtctccgtgcgcgccgaccgcgtccagatcctcaccgtgcacaaggctaag
ggactggagtggcgccacgtcgccgtggtgcacgccgacgaccgcacgtggaaggcgacc
ccggagaccttcctgacccgcccgcacaccctgcccccggagctgcgcggcgacgccgac
gagaccgtccagttcgccccggacgccgagaaccgcaaggagttcgagaccggcgcgaag
gccttcatcgaggaggtgcgcgccaccgaggcccaggaggcgacccgcctgttctacgtc
gcggtcacccgcgccgagcgcacgctgacggtcaccggctccgcgctcaacgacaccgcg
agcaggcccgcggccgcctacgggatgctcgagctgctcgccgggcacgcccccgacgcc
gtcgagacctggttcgacccggccgcggaacccgccggggacaccgacggcaccgctgca
gacaccgacggcgccgccgcagccaccggggacgccgccgcggcgcaggccgcggcgaac
cgcaccacggcgacgcaggaggcgacgccgggcgacgggacgtcggcaagcgaggccccg
gcgctcttcccggccgtcgacgccgacgccgccgtgcgcgccggcgccgagcaggtgcgc
gccgcccgcggggagctgcccgcggccgccgacgacgagctgtcgacccagtgggaggcc
gacgccaccgcgctgatcgaggagcgacgggcactcgacgcccccgacgtcgaggtggag
ctctccgggaggctgaccgccagcgacctggtcaacctggggcgcgacccggacgccttc
gcccggcgccagcgtcggccggtgccgttcaagccgaactcgtacgccaagcgcggcacc
gccttccactcctggctcgaggaacgcttcggcggccagagcctgatcgacgaggaccag
ctgccgggcctcggcgaggaggaggtcgccccggcggagctggcccacctcaaggagcgc
ttcctcgagagcgcctgggccgagcgcactccgcagctcgtcgagcaccccttcgagctc
gcggtcggcggctcggtggtgcgcgggcgcatggacgccgtcttccgcgaccccgagggc
ggctggatcatcgtcgactggaagaccggcgcgccgccgcgcggggcggacctgcgcgcc
gccgccgtgcagctggccgtctaccgggaggccttccgcgagctgctggccgcccgcggg
cgcggcgacgagccggtgcgcgcggccttccactacgtcgccgccggctacacgctggag
ccggcggacctgcccgggcgcgccgaactggaggccctcctcgacgtcgactga
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