Corynebacterium frankenforstense: CFRA_07235
Help
Entry
CFRA_07235 CDS
T04872
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cfk
Corynebacterium frankenforstense
Pathway
cfk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFRA_07235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfk03019
]
CFRA_07235
03016 Transfer RNA biogenesis [BR:
cfk03016
]
CFRA_07235
Enzymes [BR:
cfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CFRA_07235
Messenger RNA biogenesis [BR:
cfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFRA_07235
Transfer RNA biogenesis [BR:
cfk03016
]
Prokaryotic type
tRNA degradation factors
CFRA_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
APT89083
UniProt:
A0A1L7CTA6
LinkDB
All DBs
Position
complement(1623014..1625299)
Genome browser
AA seq
761 aa
AA seq
DB search
MAKKKNARTSQPKPDNNVEFDFDDDFDIHTAIAVLDNGDFGTRELRFETGQLARQAGGSV
TTYLDEDTMLLATTTASSKPREGIDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAIL
ACRLIDRPLRPTFVKGLRNEVQVVITVMSQDPDEFYDVVAINGASAATQLSGLPVSGPVG
GVRMALIVDEDHEDGQWVAFPNAEQHENALFELVVAGRIVEREENGRTVEDVAVMMVEAG
AGEHVVARVDDGAPAPTEEIVAGGLEAAKPFIETLCRAQAGLTERAGKDTREFPLFPDYT
DEVFKKVEKKAAKKLRELLTIPGKQDRDDATNEYMVEVERQLLGDEPDADEAKAVRAAYN
ALMKQIVRSMILRDGFRIDGRSTTDIRDLGVEVDLVPRAHGSALFERGETQILGVTTLDM
LKMEQHIDSLSPVTSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALLPVIPSR
EEFPYAIRQVSEALGSNGSTSMGSVCASTLSLLNAGVPLKAPVAGIAMGLVSGEVDGETE
YVALTDILGAEDAFGDMDFKVAGTADFVTALQLDTKLDGIPSKVLAAALRQAREARHTIL
DTMAEVIDGPDEMNELAPRIETLSIPVNKIGELIGPKGKTINAITEETGADVSIEDDGTV
YVSATGGKAAEAAIEKINAIANPQLPKVGERYLGTVVKTVAFGAFVSLTPGRDGLIHISK
LGGDKRIDKVEDVINVGDTVEVEIADIDNRGKISLVPVDED
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
ttggctaagaagaagaacgcccgtacgagccagccgaagcccgacaacaacgtcgagttc
gacttcgacgacgacttcgacatccacaccgccatcgccgtcctggacaacggcgacttc
ggcacccgcgagctccggttcgagaccggccagctggcccgccaggccggcggctcggtg
acgacctacctcgacgaggacacgatgctgctggccaccaccaccgcgtcgtccaagccg
cgcgagggcatcgacttcttcccgctgaccgtcgacgtcgaggagcggatgtacgccgcc
gggcgcatccccggctcgttcttccgccgcgagggccgcccctcgaccgacgccatcctg
gcctgccgcctgatcgaccgcccgctgcgcccgaccttcgtcaagggcctgcgcaacgag
gtccaggtcgtcatcaccgtcatgtcccaggaccccgacgagttctacgacgtcgtcgcc
atcaacggcgcctccgccgccacccagctgtccggcctgccggtctccggcccggtcggc
ggcgtgcgcatggcgctgatcgtcgacgaggaccacgaggacggccagtgggtcgccttc
ccgaacgccgagcagcacgagaacgccctgttcgagctcgtcgtcgccggccgcatcgtc
gagcgcgaggagaacggccgcaccgtcgaggacgtcgccgtgatgatggtcgaggccggc
gccggtgagcacgtcgtcgcccgcgtcgacgacggcgccccggccccgaccgaggagatc
gtcgccggtggcctcgaggccgccaagcccttcatcgagaccctgtgccgcgcccaggcc
ggcctgaccgagcgcgcgggcaaggacacccgcgagttcccgctcttcccggactacacc
gacgaggtgttcaagaaggtcgagaagaaggccgccaagaagctgcgcgagctgctgacc
atcccgggcaagcaggaccgcgacgacgcgaccaacgagtacatggtcgaggtcgagcgc
cagctgctcggcgacgagccggacgccgacgaggccaaggccgtgcgcgccgcctacaac
gcgctgatgaagcagatcgtgcgctccatgatcctgcgcgacggcttccgcatcgacggc
cgttccaccacggacatccgtgacctgggcgtcgaggtcgacctggtcccgcgcgcccac
ggctccgccctcttcgagcgcggcgagacccagatcctgggcgtgaccaccctggacatg
ctcaagatggagcagcacatcgactcgctgtccccggtgacctcgaagcgctacatccac
cactacaacttcccgccgtactccaccggcgagacgggccgcgtgggctccccgaagcgc
cgcgagatcggccacggcgcgctcgccgagcgtgccctgctgccggtgatcccctcgcgc
gaggagttcccctacgccatccgtcaggtctccgaggccctgggctccaacggctcgacc
tcgatgggctccgtgtgcgcctcgacgctctccctgctcaacgcgggtgtgccgctgaag
gcgccggtcgccggcatcgccatgggcctggtctccggtgaggtcgacggcgagaccgag
tacgtcgcgctgaccgacatcctcggcgccgaggacgcgttcggcgacatggacttcaag
gtcgccggcaccgccgacttcgtcaccgccctgcagctggacaccaagctcgacggcatc
ccctcgaaggtcctggccgccgcgctgcgccaggcccgcgaggcccgccacaccatcctg
gacacgatggccgaggtcatcgacggcccggacgagatgaacgagctggccccgcgcatc
gagacgctgtccatcccggtcaacaagatcggtgagctgatcggaccgaagggcaagacg
atcaacgcgatcaccgaggagaccggcgccgacgtctccatcgaggacgacggcaccgtc
tacgtctccgcgaccggcggcaaggccgccgaggccgcgatcgagaagatcaacgccatc
gccaacccgcagctgcccaaggtcggcgagcgctacctgggcaccgtggtcaagaccgtc
gccttcggcgcgttcgtctccctgaccccgggccgcgacggcctgatccacatctcgaag
ctcggcggcgacaagcgcatcgacaaggtcgaggacgtcatcaacgtcggcgacaccgtc
gaggtcgagatcgccgacatcgacaaccgcggcaagatctccctggtcccggtcgacgag
gactga
DBGET
integrated database retrieval system
