Corynebacterium frankenforstense: CFRA_11375
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Entry
CFRA_11375 CDS
T04872
Name
(GenBank) DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cfk
Corynebacterium frankenforstense
Pathway
cfk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFRA_11375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfk03400
]
CFRA_11375
Enzymes [BR:
cfk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFRA_11375
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFRA_11375
DNA repair and recombination proteins [BR:
cfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFRA_11375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Fapy_DNA_glyco
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-ProteinID:
APT89725
UniProt:
A0A1L7CV28
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All DBs
Position
2558643..2559566
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AA seq
307 aa
AA seq
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MPEGHVIHRLASQLTETFGGQEVEVSSPQGRFATEAARLDGTVLRSAEAWGKHLFIDFSP
AGSSGDPAETDRPAAGPTGVDDTAGAAGTAAGTHLPHPVVHIHLGLIGKFNVAPFAEPVG
QVRLRIADANETVAADLHGPQWCRLLSVPEKEAEIAKQGADPLRADADPSEALAKVSRSR
RAIGALLMDQKLFAGVGNIYRAETLFRLGVSPFTPGRDVPQKVLRAIWADLVELMAVGVA
RGRIDTVRPEHTPEAMHRAPRKDDHGGEVYVYRRAGQPCLVCGTPVEQKVMDGRNLFWCP
SCQPGRR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccggagggacacgtcatccaccgcctcgcgagccagctgacggagacgttcggcggc
caggaggttgaggtctcctcgccgcagggccgcttcgccaccgaggccgcccgactcgac
ggcacggtgctgcgctccgcggaggcgtggggcaagcacctcttcatcgacttctccccc
gccggctcgtccggcgaccccgccgagaccgacaggcccgcggccggcccgaccggggtc
gacgacaccgcaggcgccgcgggcaccgcggcgggcacgcacctcccccaccccgtcgtc
cacattcacctgggactgatcggcaagttcaacgtcgcgcccttcgccgagccggtcggc
caggtccggctgcgcatcgccgacgcgaacgagaccgtcgccgccgacctgcacggcccg
cagtggtgccggctgctcagcgtcccggagaaggaggccgagatcgccaaacagggcgcc
gacccgctgcgcgcggacgccgacccctcggaggccctcgcgaaggtgtcccgctcccgg
cgcgccatcggcgcgctgctgatggaccagaagctcttcgccggggtgggcaacatctac
cgcgcggagaccctcttccgcctcggcgtctcccccttcaccccgggccgcgacgtcccg
cagaaggtcctccgggcgatctgggccgatctggtggaactgatggccgtgggcgtcgcc
cgcggccggatcgacacggtgcgcccggaacacacgcccgaggcgatgcaccgcgccccg
cgcaaggacgaccacggcggcgaggtctacgtctaccgccgcgccggccaaccgtgcctg
gtctgcggcaccccggtcgagcagaaggtgatggacgggcgcaacctcttctggtgcccg
tcctgccagccgggccggcgctga
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