Cellulomonas flavigena: Cfla_0549
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Entry
Cfla_0549 CDS
T01230
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cfl
Cellulomonas flavigena
Pathway
cfl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cfla_0549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfl03400
]
Cfla_0549
Enzymes [BR:
cfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Cfla_0549
DNA repair and recombination proteins [BR:
cfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Cfla_0549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
HopBA1
Motif
Other DBs
NCBI-ProteinID:
ADG73462
UniProt:
D5UIG3
LinkDB
All DBs
Position
complement(587848..588642)
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AA seq
264 aa
AA seq
DB search
MLLATWNINSIRARVDRAVAFLERTGVDVLALQETKVKDEAFPREPFEALGYEVATHGYS
QWNGVAIVSRVGLTDVERGFPGQPTWGDPGVAEARALGATCGGVRVWSLYVPNGREIEDP
HYTYKLDWLGALRDAAEGWLTADPRAQVALVGDWNIAPLDTDVWDIARFAGRTHVTPAER
QAFEALAHAGYSEVSRVHVPAEHTYTYWDYQQLRFPRNEGMRIDLTYASPTLAARVTGVR
IERDERKGKQPSDHVPVVLEIAEP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggcgacgtggaacatcaactcgatccgggcgcgcgtggaccgggcggtcgcg
ttcctcgagcgcacaggcgtcgacgtgctcgcgctgcaggagacgaaggtcaaggacgag
gcgttcccgcgcgagccgttcgaggcgctcgggtacgaggtcgccacgcacgggtactcg
cagtggaacggcgtcgcgatcgtttcgcgcgtgggcctgacggacgtcgagcgcggcttc
ccggggcagccgacgtggggcgacccgggcgtcgccgaggcccgcgcgctcggcgcgacg
tgcggcggcgtgcgcgtgtggagcctgtacgtgccgaacggtcgcgagatcgaggacccg
cactacacgtacaagctcgactggctcggtgcgctgcgcgacgccgcggagggctggctg
accgcggacccgcgagcgcaggtcgcgctcgtcggcgactggaacatcgccccgctcgac
accgacgtgtgggacatcgcccggttcgccggccgcacgcacgtcacgcccgccgagcgg
caggccttcgaggccctcgcccacgcgggctacagcgaggtgtcgcgcgtgcacgtgccc
gccgagcacacctacacgtactgggactaccagcagctgcgcttcccgcggaacgagggc
atgcgcatcgacctcacgtacgccagccccacgctggcggcacgcgtcaccggcgtgcgg
atcgagcgcgacgagcgcaagggcaagcagccgtcggaccacgtgccggtcgtgctcgag
atcgcggagccctga
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