KEGG   Cellulomonas flavigena: Cfla_1541
Entry
Cfla_1541         CDS       T01230                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cfl  Cellulomonas flavigena
Brite
KEGG Orthology (KO) [BR:cfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfl03400]
    Cfla_1541
Enzymes [BR:cfl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Cfla_1541
    5.6.2.6  RNA 3'-5' helicase
     Cfla_1541
DNA repair and recombination proteins [BR:cfl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Cfla_1541
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr WH2_Lhr Helicase_C ResIII DUF6406 AAA_25
Other DBs
NCBI-ProteinID: ADG74439
UniProt: D5UDA2
LinkDB
Position
complement(1711958..1717042)
AA seq 1694 aa
MVLDRFSDPTRAWFTGAFAAPTAAQTGAWEAVSGGDHALVVAPTGSGKTLAAFLWALDGL
LTGEAPADPTQRCRVVYVSPLKALATDVERNLRSPLVGVRQAATRLGRALPEVTVGIRTG
DTPPAERRAFATSPPDVLITTPESLYLVLTSAARRGLAGVRTVIVDEIHAVAATKRGAHL
ALSLERLDALLEAEGGPGPAQRVGLSATVRPVDAVASFLGGARPPAEGGRQVVVVQPPSQ
KVIDVQVVVPVPDLGDLAAAARPGASGTTPGTVDRYGGPGIDPDLAGFGAPAPGAAPLEP
VPSPPRTSIWPHVEERVVDLVAEHRSTLVFTNSRRGAERLTARINEVWAERRGGDVPDPG
AAQPAAAPGQSGTSAGVDTRDASTIVARAHHGSMSRAERTRTESELKAGRLPAVVATSSL
ELGIDMGALDLVVQVGAPPSVASGLQRVGRAGHQVGAVSRGVVFPTYRGELVAAAVTAQR
MRTGELEALAVPTTPLDVLAQQLVAMAAVDDWPVDDLARVVRRAAPFATLGDATLHAVLD
MLAGRYPSEDFAELRPRVVWDRVADVVSGRPGALRLAVTSGGTIPDRGLFGVFLAGDAGT
SDVPADAERTGGRVRGGKRVGELDEEMVYESRVGDTFTLGSSTWRIEDITPDRVLVTPAP
GVPGRLPFWKGDAPGRPAELGRALGAWVRELAALPDDGARERAEQAGLDPWAADNLLAYL
RDQQEATGQVPSDRVVVVERFRDELGDWRIVLHSPYGARVHAPWALVLAARLRERYGVDA
AAMHADDGIVLRLPDVLDGAADGTWGDDAGADAGPRLSLEDLLLDPDEVLPAVRDELGAS
AMFAARFREAAGRALLLPRRRPDRRQPLWQQRQRAAQLLEVASRYPDFPILLEAVRECLQ
DDFDTEALTGLMRDVGAGRVRVVEVTTAHPSPFAQSLLFGYTAQFLYEGDAPLAERRAAA
LTLDPTLLAELLGTGGESQLADLLDPEAVQRTEAELAGTAPDRQAGTLEQVADVLRRHGP
LPTAEVEARTRPEVRDEVPAWLAELESARRAIRVRLGGVPADRAEQWAAVEDAGRLRDAL
GVALPVGVPEVFTEVLPDPLADLLRRHARTRGPFPAAQAATRFGLGVAVVTEVLRRLEAS
RVLVQGRLRPDVLGGTGDEFCDADVLRRLRQRSLAALRAQVEPVDPQALGVFLPQWQGVQ
GVGRRASGLRGVDAVARAVEQLAGFAVPASALESHVLPARVPDYVPAMLDELTSAGEVLW
AGHAPLAGHDGLVSLHPAGVADLTLAPVPDLDDPEASASDRVHRAVLSSLEGGGAWFLGA
LVDRVAAVWLDEDAPPGAAAVLEALWDLVWAGRVTNDGLGPLRAWLAAGPTAHRTRTAPA
RGRPVRPRLGLRAGGRLGVPPSVRDAAAARATGTASGPGAGRWSLLPAREPDPTVRAHAL
AAQLLDRHGVLTRAVAPAEGIGGRFADVYRVLAALEQSGQVRRGYFVERLGGSQFALPGA
VDQLRADAEVVDRARERAADRHDSPTAGPHLPWQDVPAPAWGAPSGPGTWSGTAPGRSSS
RDQPWVVVLAATDPANPYGAALAWPDPPPGRDGSGHRPGRKAGALVALVDGALALYLERG
GRTLLTFSQDPAVLAAAAGALVTTTRARRAGRLTVERIDGAQVLSSDVLSSPAAVALTAA
GFLTTPRGLRLQAS
NT seq 5085 nt   +upstreamnt  +downstreamnt
gtggtgctcgaccgcttctccgacccgacccgggcgtggttcaccggtgccttcgcggcg
cccacggcggcgcagacgggggcgtgggaggccgtgtccggcggggaccacgcactggtc
gtggccccgaccgggtcgggcaagacgctcgccgcgttcctctgggcgctcgacgggctg
ctgacgggtgaggctccggcggacccgacgcaacggtgccgcgtggtgtacgtctcgccc
ctgaaggcgctggccacggacgtggaacgcaacctgcgctcgccgctggtcggcgtccgg
caggccgcgacgcgcctggggcgcgcgctgccggaggtcacggtcgggatccgcacgggt
gacacacccccggccgagcggcgggcgttcgcgacctcgccgcccgacgtgctcatcacg
acgcccgagtcgctctacctcgtgctgacgtcggcggcccgccggggactcgcgggcgtg
cggaccgtgatcgtcgacgagatccacgcggtggccgcgacgaagcgcggtgcgcacctc
gcgctcagtctcgagcggctcgacgcgctgctggaggccgagggcggaccggggcccgcg
cagcgcgtcggcctctccgccacggtgcgaccggtcgacgcggtggcgtcgttcctcggc
ggcgcccgcccgccggccgagggcggccggcaggtcgtggtcgtgcagccgccgtcgcag
aaggtcatcgacgtgcaggtcgtcgtgccggtgccggacctgggcgacctcgccgcggcc
gcacgcccgggtgcgagcgggaccacgcccggcacggtcgaccggtacggcggacccggg
atcgaccccgacctcgcgggcttcggcgcgccggcacccggtgcggccccgctcgagccc
gtcccctcaccgccgcgcacgtcgatctggccgcacgtcgaggagcgcgtggtcgacctc
gtcgcggagcaccgctcgaccctggtcttcaccaactcgcgccgcggcgccgagcggctc
accgcgcgcatcaacgaggtgtgggccgaacggcggggcggggacgtgcccgacccgggc
gcggcgcagccggcggccgccccggggcagtccggcacgtcggcgggcgtcgacacgcgc
gacgcctcgacgatcgtggcgcgggcgcaccacggctcgatgagccgcgccgagcgcacc
cggaccgagtccgagctcaaggcaggccggctgcccgccgtggtcgcgacgagctcgctc
gagctcgggatcgacatgggcgcgctcgacctcgtcgtgcaggtgggcgcgccgccgtcg
gtggccagcgggttgcagcgcgtcgggcgcgcggggcaccaggtcggtgcggtgtcgcgc
ggtgtcgtgttccccacgtaccgcggcgagctcgtcgcggcggccgtgaccgcgcaacgc
atgcgcacgggtgagctcgaggccctcgcggtccccaccacccccctcgacgtgctcgcg
cagcagctcgtggcgatggccgcggtcgacgactggccggtggacgacctcgcgcgagtc
gtgcgtcgtgcggcgccgttcgcgacgctgggcgacgcgacgctgcacgcggtgctcgac
atgctcgccggccgctacccgtcggaggacttcgccgagctgcggccgcgcgtcgtgtgg
gaccgggtcgccgacgtggtctcggggcgcccgggcgcgttgcgcctcgcggtgacgagc
ggcggcacgatcccggaccgtgggctgttcggcgtgttcctcgcgggcgacgccgggacc
agcgacgtgccggcggacgccgagcggacgggtggtcgggtgcgcggcggcaagcgcgtc
ggcgagctcgacgaggagatggtctacgagtcccgcgtcggcgacacgttcaccctgggg
tcgagcacgtggcgcatcgaggacatcacgcccgaccgcgtgctcgtgaccccggcgccg
ggtgtacccggccggctgccgttctggaagggcgacgcacccgggcgccccgccgagctc
ggccgggcgctgggcgcgtgggtgcgcgagctcgccgcactgcccgacgacggggcgcgc
gagcgcgcggagcaggcgggcctcgacccgtgggccgccgacaacctgctggcctacctg
cgtgaccagcaggaggcgacgggtcaggtgccgagcgaccgcgtggtcgtggtcgagcgc
ttccgtgacgagctcggcgactggcgcatcgtgctgcactccccgtacggcgcgcgggtg
cacgcgccgtgggcgctcgtcctggcggcgcgcctgcgcgagcggtacggcgtcgacgcg
gccgccatgcacgccgacgacggcatcgtgctgcgcctgcccgacgtgctcgacggcgcg
gccgacggcacgtggggcgacgacgcgggtgccgacgccggaccgcggttgtcgctcgag
gacctgctgctcgacccggacgaggtgctgccggccgtgcgcgacgagctcggggcgtcc
gcgatgttcgcggcgcggttccgcgaggccgccggccgggcgctgctgctcccccggcgc
cgtccggaccgccggcagccgctgtggcagcagcgtcagcgcgcggcccagctgctcgag
gtcgcgtcgcgctacccggacttcccgatcctgctcgaggcggtgcgcgagtgcctgcag
gacgacttcgacaccgaggcgctcaccggcctcatgcgcgacgtgggtgccgggcgcgtg
cgcgtcgtcgaggtgacgaccgcgcacccctcacccttcgcgcagtcgctgctgttcggg
tacaccgcacagttcctgtacgagggcgacgctccgctcgccgagcgccgcgcggcagcc
ctcaccctcgacccgacgctgctcgcggagctgctcggcaccggcggcgagtcgcagctc
gcggacctgctcgaccccgaggccgtgcagcgcaccgaggccgagctcgcggggacggcg
cccgaccggcaggccggcacgctcgagcaggtggctgacgtgctgcgtcggcacggcccg
ctgccgaccgccgaggtcgaggcccgcacgcgacccgaggtgcgcgacgaggtgcccgcc
tggctcgcggagctggagtccgcccggcgcgcgatccgcgtgcgcctggggggcgtgccg
gccgaccgcgcggagcagtgggcagccgtggaggacgccgggcggctgcgcgacgcgctc
ggcgtggcgctgcccgtgggcgtgcccgaggtgttcaccgaggtgctccccgacccgctg
gcggacctgctgcggcgccacgcccgcacgcgcggtccgttccccgcggcgcaggcggcc
acccggttcgggctcggcgtcgccgtcgtcaccgaggtgctgcgccggctggaggcctcg
cgcgtcctcgtccagggccgtctgcggcccgacgtgctgggcggcacgggcgacgagttc
tgcgacgccgacgtgctgcggcggctgcggcagcgctcgcttgccgcgctgcgcgcccag
gtcgagccggtcgacccacaggctctcggcgtgttcctcccgcagtggcagggcgtgcag
ggcgtgggacggcgtgcgagcgggctgcgcggtgtcgacgcggtcgcgcgcgcggtcgag
cagctcgccgggttcgccgtaccggcgtcggcgctcgagtcccacgtgctgcccgctcgc
gtgcccgactacgtcccggcgatgctcgacgagctcacgtcggccggcgaggtgctgtgg
gcgggtcacgcaccgctggcggggcacgacggcctggtctcgctgcacccggcgggcgtc
gccgacctcacgctcgcgccggtgccggacctcgacgaccccgaggcgagcgcgtccgac
cgcgtgcaccgggccgtgctctcgtccctcgagggcggcggggcgtggttcctcggcgcg
ctcgtggaccgcgtggcggccgtctggctcgacgaggacgcaccgcccggtgcggcggcc
gtgctggaggccctgtgggacctcgtgtgggccggccgcgtcaccaacgacggtctcggt
ccgctgcgggcctggctcgccgccgggccgaccgcgcaccgcacgcgtaccgcccctgcg
cgcggccgcccggtgcgcccgcgtctcggcctgcgtgcgggcgggcggctcggcgtgccg
ccgtccgtgcgcgacgccgcggccgcacgggccacgggcaccgcgtcggggcccggggcc
ggccgctggtcgctgctgccggcgcgcgagccggacccgacggtgcgggcgcacgcgctc
gccgcccagctcctcgaccggcacggcgtgctcacgcgcgcggtcgccccggccgagggc
atcggcggccggttcgcggacgtgtaccgcgtgctcgcggcgctcgagcagtccgggcag
gtgcggcgcgggtacttcgtcgaacggctcgggggctcgcagttcgcgttgccgggtgcc
gtggaccagctgcgggcggacgcggaggtcgtcgaccgggcgcgcgagcgtgcggccgac
cgacacgactctcccaccgccgggccccacctgccgtggcaggacgtgcccgcacccgcg
tggggcgcgccgagcggtcccggcacgtggtccggcaccgcaccgggccggtcgtcgtcg
cgggaccagccgtgggtcgtcgtgctggccgcgaccgacccggcgaacccgtacggcgcc
gcgctcgcgtggcccgacccgccgcccggccgcgacgggagcggtcaccggccggggcgg
aaggcgggcgcgctcgtcgcgctcgtcgacggtgccctcgcgctgtacctcgagcgtggc
ggccgcacgctgctgacgttctcgcaggacccggcggtgctcgctgccgccgcgggggcc
ctggtgaccaccacgcgcgcccgccgcgccggtcgtctcacggtcgagcgcatcgacggc
gcccaggtgctctcgtcggacgtgctgtcctcgccggcagccgtcgcgctgaccgccgcc
ggcttcctcacgaccccgcgcggcctgcgcctgcaggcgtcgtga

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