Cellulomonas flavigena: Cfla_1606
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Entry
Cfla_1606 CDS
T01230
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cfl
Cellulomonas flavigena
Pathway
cfl03030
DNA replication
cfl03430
Mismatch repair
cfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cfla_1606
03430 Mismatch repair
Cfla_1606
03440 Homologous recombination
Cfla_1606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfl03032
]
Cfla_1606
03400 DNA repair and recombination proteins [BR:
cfl03400
]
Cfla_1606
Enzymes [BR:
cfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cfla_1606
DNA replication proteins [BR:
cfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cfla_1606
DNA repair and recombination proteins [BR:
cfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cfla_1606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MCM10_OB
DUF655
DUF2490
Motif
Other DBs
NCBI-ProteinID:
ADG74504
UniProt:
D5UDU6
LinkDB
All DBs
Position
1786005..1789568
Genome browser
AA seq
1187 aa
AA seq
DB search
MAAGGTEDPSFVHLHVHSEYSMLDGAARIGEMLDEAKRLGQTAMAITDHGYLFGAFEFWQ
KATERGIKPIIGVEAYVTPGTSRFDQNRVRWGEAHQAADDVSARGAYTHLTLLSRTTEGM
HNLFRMGSLASVEGQMGKWPRMDRELLSRYADGLIATSGCPSGEIQTRLRLGHVDEALRA
AGELQDIFGKEHFFVEVMDHGLEIERRVIKDLLRIAEGIGAPIVATNDLHYTREEDAHAH
EVLLAVQSGSTLDEPTSDQGGSRFAFGGTGYYVKSAAEMRRTWAELPEACDNTLLVAEQC
EVKFNTGANYMPRFPVPAGENEDSWFVKEVENGLLRRYHGAIPDHVRKQADYETGVITQL
GFSGYFLVVADFINWAKKQGIRVGPGRGSAAGSMASYAMGITELDPLEHGLIFERFLNPE
RVSWPDVDVDFDERRRGEVIRYVTEKYGDDRVCQIVTYGTIKAKQALKDASRVLGFPFAM
GEKLTKAMPPPVMGKDIPLSGMYDPEHPRYAEADEFRQVVAADPEAQRVLETARGLENLK
RQWGVHAAGVIMSSEPLLDIIPIMKRPQDGAIITQFDQPASESLGLIKMDFLGLRNLTIL
DDALENIVMNGKPPILIEEVALDDPPTYELLGRGDTLGVFQLDGGPMRSLLRQMRPDNFE
DVSAVIALYRPGPMGMNSHTNYALRKNGLQEIEPIHPELVEPLEDVVGVTYGLIVYQEQV
QRAAQKLAGYSLGQADLLRRAMGKKKKEVLDKEFVPFQAGMRERGYSDAAIQAVWDVLVP
FAGYAFNKAHSAAYGVVSYWTAYLKANFPTEYMAALLTSVRDDKDKSALYLGECRHMGIT
VLPPDVNSSSANFTAVGKDIRFGLTAVRNVGANVVDAIVAAREEKGAFTSFTDFLDKVPA
VVCNKRTIESLIKAGAFDSLGHARRALLLVHEQAVDAVIDVKRKEATGQFDLFADLGGGD
ETGTGIAVQIPDLPDWDKKQRLAFEREMLGLYVSDHPLSGLEHVLSAQADVSIATLNADT
ERPDGSTVVVAGLVTSLQRKMSKQGNPWAAVTLEDMEGGVEIMFFGETYLAYSTVLAEDA
VLVVRGRVRRRDDTMQLQAMEVTIPDTSQAADAPVVVSLSEGRCTPPVVERLREVLSTHP
GVTEVHLRLTSPGRAVVMRLDDGLRVERSPSLFGDLKALLGPSCLAS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggcagccggaggaaccgaggacccgtcgttcgtccacctccacgtgcacagcgagtac
tcgatgctcgacggcgccgcgcgcatcggcgagatgctcgacgaggccaagcgcctgggt
cagacggcgatggcgatcaccgaccacggttacctcttcggtgccttcgagttctggcag
aaggcgaccgagcggggcatcaagcccatcatcggcgtcgaggcgtacgtcacccccggc
acgagcaggttcgaccagaaccgcgtgcggtggggtgaggcccaccaggcggcggacgac
gtctcggcgcgcggtgcgtacacgcacctgacgctgctgagccgcacgaccgagggcatg
cacaacctgttccggatgggctcgctcgcctccgtcgaggggcagatgggcaagtggcca
cgcatggaccgcgagctgctgtcgcggtacgccgacggcctgatcgcgacgagcggctgc
ccgtcgggcgagatccagacccggctgcggctggggcacgtcgacgaggcgctgcgcgcc
gcgggcgagctgcaggacatcttcggcaaggagcacttcttcgtcgaggtcatggaccac
ggcctggagatcgagcgccgtgtcatcaaggacctgctgcggatcgccgaggggatcggt
gcgccgatcgtcgcgacgaacgacctgcactacacgcgtgaggaggacgcgcacgcgcac
gaggtgctgctcgcggtgcagtccggttcgacgctcgacgagccgaccagcgaccagggc
ggcagccgcttcgcgttcggcggcaccgggtactacgtgaagtcggcggcggagatgcgc
cgcacgtgggccgagctgccggaggcgtgcgacaacacgctgctcgtcgccgagcagtgc
gaggtgaagttcaacaccggcgccaactacatgccgcgcttccccgtcccggcgggcgag
aacgaggactcgtggttcgtcaaggaggtcgagaacggtctcctgcgtcgttaccacggc
gcgatcccggaccacgtgcgcaagcaggcggactacgagacgggcgtcatcacgcagctc
gggttctcgggctacttcctcgtggtcgccgacttcatcaactgggccaagaagcagggc
atccgcgtcgggccgggccgtggctccgccgccgggtcgatggcgtcgtacgcgatgggc
atcaccgagctcgacccgctggagcacggcctgatcttcgagcggttcctcaaccccgag
cgcgtctcgtggcccgacgtcgacgtcgacttcgacgagcgccggcgcggggaggtcatc
cggtacgtgacggagaagtacggggacgaccgggtctgccagatcgtcacgtacggcacc
atcaaggccaagcaggcactgaaggacgcgtcgcgcgtgctgggcttcccgttcgccatg
ggggagaagctcaccaaggccatgccgccgcccgtcatgggcaaggacatcccgctctcg
ggcatgtacgacccggagcacccgcgctacgcggaggccgacgagttccggcaggtcgtc
gccgcggaccccgaggcgcagcgcgtgctggagaccgcgcgtggcctggagaacctcaag
cggcagtggggtgtgcacgcggccggcgtgatcatgtccagcgagccgctgctcgacatc
atcccgatcatgaagcgcccgcaggacggcgcgatcatcacccagttcgaccagccggcg
tccgagtcgctcgggctcatcaagatggacttcctggggctgcgcaacctcacgatcctc
gacgacgcgctcgagaacatcgtgatgaacggcaagccgcccattctcatcgaggaggtg
gcgctcgacgatcctccgacgtacgagctgctgggccggggtgacaccctgggggtcttc
cagctcgacggcggcccgatgcgctcgctgctgcggcagatgcgcccggacaacttcgag
gacgtctccgccgtcatcgcgctgtaccgccccggcccgatgggcatgaactcgcacacc
aactacgccctgcgcaagaacgggctgcaggagatcgagccgatccaccccgagctggtg
gagccgctcgaggacgtcgtcggcgtgacctacggcctcatcgtctaccaggagcaggtg
cagcgcgccgcgcagaagctcgccggctactcgctcgggcaggccgacctgctccgtcgt
gcgatgggcaagaagaagaaggaggtgctcgacaaggagttcgtgcccttccaggcgggc
atgcgcgagcgcgggtactccgacgcggcgatccaggcggtgtgggacgtgctcgtcccg
ttcgcgggctacgcgttcaacaaggcgcactccgcggcgtacggcgtggtctcgtactgg
acggcgtacctcaaggcgaacttcccgaccgagtacatggcggcgctgctcaccagcgtg
cgcgacgacaaggacaagtcggcgctgtacctgggcgagtgccgtcacatgggcatcacg
gtgctcccgccggacgtgaactcgtcctcggcgaacttcacggccgtgggcaaggacatc
cggttcggcctgacggccgtgcgcaacgtcggcgccaacgtggtcgacgcgatcgtcgcg
gcgcgcgaggagaagggcgcgttcacgtccttcacggacttcctcgacaaggtgcccgcg
gtggtctgcaacaagcggacgatcgagtcgctcatcaaggccggggcgttcgactcgctc
ggtcacgcgcgccgggcgctgctgctggtgcacgagcaggcggtcgacgccgtcatcgac
gtcaagcgcaaggaggcgacgggccagttcgacctgttcgccgacctcggtggcggcgac
gagacgggcacgggcatcgccgtgcagatcccggacctgccggactgggacaagaagcag
cggctggcgttcgagcgggagatgctcggcctgtacgtctcggaccacccgctgtcgggg
ctcgagcacgtgctgtcggcgcaggcggacgtgtcgatcgcgacgctcaacgcggacacc
gagcgacccgacggctcgaccgtcgtcgttgccggcctggtgacgagcctgcagcgcaag
atgtccaagcagggcaacccgtgggccgcggtcacgctcgaggacatggagggcggcgtc
gagatcatgttcttcggcgagacgtacctcgcctactcgacggtgctggcggaggacgcg
gtgctcgtggtgcgggggcgcgtgcgccgccgtgacgacaccatgcagctgcaggcgatg
gaggtgacgatcccggacacgtcgcaggccgcggacgcgccggtcgtggtgtcgctgtcc
gaggggcgctgcacgccgcccgtcgtggagcggctgcgcgaggtgctctcgacgcacccg
ggggtcacggaggtgcacctgcgcctgacgagcccgggccgggcggtggtcatgcggctc
gacgacgggctgcgcgtcgagcgctcgccgtcgctgttcggtgacctcaaggcgttgctc
ggtccgagctgcctcgcgagctga
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integrated database retrieval system
