Cellulomonas flavigena: Cfla_1893
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Entry
Cfla_1893 CDS
T01230
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cfl
Cellulomonas flavigena
Pathway
cfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cfla_1893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfl03019
]
Cfla_1893
03009 Ribosome biogenesis [BR:
cfl03009
]
Cfla_1893
Enzymes [BR:
cfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Cfla_1893
Messenger RNA biogenesis [BR:
cfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cfla_1893
Ribosome biogenesis [BR:
cfl03009
]
Prokaryotic type
rRNA helicases
Cfla_1893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Ser_hydrolase
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADG74790
UniProt:
D5UEY0
LinkDB
All DBs
Position
2103194..2104939
Genome browser
AA seq
581 aa
AA seq
DB search
MSTSLPASASAQDATTFADLGLDPRVLSAVHGLGFTAPTPVQAQTIPALLAGRDVVGVAQ
TGTGKTAAFGLPLLQSVDPDVAAVQVVVLTPTRELAMQVADALTSFAADMPGLQVVAVYG
GSPYLPQQRALARGAQVVVGTPGRVIDHIDRRTLRLDDVRMLVLDEADEMLRMGFAEDVD
KVLSGTPAGRQVALFSATMPPQIRRVADQHLVNPVSVAVSRQSSTVESVRQTYAVVPYRH
KAGALARVLAVSDADAAIVFVRTREAAEEIGNVLVQRGIAAAHISGDVAQADRERIVERL
RSGTLDVLVATDVAARGLDVERIGLVVNLDLPREPEAYVHRIGRTGRAGRTGEALTFVTP
SERPRLRQIERTTRTPLVEITIPTPAQVSAHRATALLGRTDARLAAGRLDVVRTAVLEHL
AAHPDVDPVDLLTAVAALAVGDEGPSAEVEYLDDAVRRARETRHEETRGGQVAGNRRRPG
TTGPSGRPRYRVAVGERDGLQPGALVGALTGEGGLTGKDVGKIDIFGSFALVDIPSGLTP
EVVDRLGRTRVAGRPLRIRLDTGPQSSRGPSRGERVHRTHA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttctctgcctgcctccgcgtccgcacaggacgcgaccacgttcgccgacctc
ggcctcgacccgcgcgtcctgtcggccgtgcacggtctggggttcacggcccccacgccc
gtccaggcgcagacgatcccggccctgctcgccggccgtgacgtcgtcggcgtcgcccag
accggcaccggcaagaccgccgccttcggcctgccgctgctgcagtccgtcgatcccgac
gtcgccgccgtccaggtcgtcgtcctgaccccgacgcgcgagctcgcgatgcaggtcgcc
gacgcgctcacctcgttcgccgccgacatgccgggcctgcaggtcgtggccgtctacggc
ggttcgccgtacctgccgcagcagcgggcgctggcgcgcggcgctcaggtcgtcgtcggc
acacccgggcgcgtcatcgaccacatcgaccggcgcaccctgcgcctggacgacgtccgc
atgctcgtgctggacgaggcggacgagatgctgcgcatgggcttcgccgaggacgtcgac
aaggtcctgtcgggcacgcccgccggccgccaggtcgcgctgttctccgcgacgatgccg
ccgcagatccgccgggtcgccgaccagcacctggtgaacccggtgtcggtggcggtctcg
cggcagtcctccaccgtcgagtccgtgcgtcagacgtacgcggtcgtgccctaccggcac
aaggccggcgccctggcccgcgtgctggccgtcagcgacgccgacgccgccatcgtgttc
gtccgcacccgcgaggccgccgaggagatcggcaacgtcctcgtgcagcgcggcatcgcg
gcggcgcacatcagcggtgacgtcgcgcaggccgaccgcgagcggatcgtcgagcggctg
cgctcgggcacgctcgacgtgctcgtggcgaccgacgtcgccgcacgtggactcgacgtc
gagcgcatcggcctcgtcgtcaacctcgacctgccgcgcgagcccgaggcgtacgtgcac
cgcatcggccgcaccggccgcgcgggccgcaccggtgaggcgctgacgttcgtcacgccg
agcgagcgaccgcgtctgcgccagatcgagcggaccacgcgcacgcccctcgtcgagatc
accatcccgacccccgcgcaggtcagcgcccaccgcgcgaccgcgctgctcgggcgcacc
gacgcgcggctcgcggccggccggctcgacgtggtccggacggcagtgctcgagcacctc
gccgcgcaccccgacgtcgaccccgtcgacctgctcacggccgtcgctgcgctcgcggtc
ggcgacgagggcccgagcgccgaggtcgagtacctcgacgacgcggtccgccgtgcgcgc
gagacgcgccacgaggagacgcgcggcggtcaggtcgcgggcaaccgccggcgacccggc
acgaccggccccagcggacgcccgcgctaccgcgtcgcggtcggtgagcgcgacggcctg
cagccgggtgcgctcgtcggcgccctcacgggcgagggcgggctgaccggcaaggacgtc
ggcaagatcgacatcttcggcagcttcgcgctcgtggacatcccctccggactcacgccg
gaggtcgtcgaccggctcggccgcacgcgcgtcgcgggccggcccctgcgcatccggctc
gacaccggcccgcagtcctcgcgcggtccgtcgcgcggcgagcgggtgcaccgcacgcac
gcctga
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