Cellulomonas flavigena: Cfla_2430
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Entry
Cfla_2430 CDS
T01230
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cfl
Cellulomonas flavigena
Pathway
cfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cfla_2430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfl03400
]
Cfla_2430
Enzymes [BR:
cfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cfla_2430
DNA repair and recombination proteins [BR:
cfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cfla_2430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Helicase_RecD
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
AAA_28
SH3_13
MeaB
Flavi_DEAD
Phageshock_PspD
NTPase_1
nSTAND3
VapE-like_dom
SRP54
SLFN-g3_helicase
Mg_chelatase
TrwB_AAD_bind
AAA_5
AAA
DO-GTPase1
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ADG75320
UniProt:
D5UHJ9
LinkDB
All DBs
Position
2725946..2727889
Genome browser
AA seq
647 aa
AA seq
DB search
MSEVTQPRAAAAAPGPDTGDPRRPWRAGPLLTTFADAGVLTSADVRVAERLGDLTGEDDP
TVHLAAALAVRAVRAGSVCVDLADAPSLVAEGSPDDPDAPLPAGTLPWPDTAAWTAAVRG
SGMVADGVDGPADRPVRWVDGRVYLDRYWRDEQVVRRDVDARLTSLLDVDDDALRRAVHA
RFPRAQDARQRVAAATAAVSRLTVLTGGPGTGKTTTVARLVAVLRDVAGPGLRIALAAPT
GKAATRLQEAVNAELARLDDAAVGGTVAAPGAARPLTASTIHRLLGWRPSSTRFAHDHAH
RLPHDVVVLDEASMVSLPLLARVLDALRPDARLVLVGDPDQLASVEVGAVLGDLVARPTR
SGPLPARLAALLPDDVPGTATSADDTRDAAALHGGVVRLVVTHRFGHELAELADAVRRGD
ADATLALLRAGGAHASLVEPAAEVPTEDEVPGLRGDVSATGARLVAAARAGDTAGALEAL
GVHRLLLAHRRGPAGVARWAALAQRWVEKTVGDLQPGPLSLGRPLLVTVNDRTTGLSNGD
IGVLVSDGAGGVVAAFGESHAPRLVRPHRLPAVETVHAMTVHRAQGSQFTFVTVLLPPAS
SPLLTRELLYTAVTRAQEHVRVVGSAEAVRRAVERPVRRASGLRFAR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaggtgacgcagccgcgcgctgccgccgcggcgccggggccggacaccggcgac
ccgcgccgcccgtggcgcgcgggtccgctgctgacgacgttcgccgacgccggggtgctg
acgtccgccgacgtgcgcgtcgcggagcgcctgggcgacctcacgggcgaggacgacccg
acggtccacctggcggccgcgctcgccgtacgggcggtgcgcgccggctcggtgtgcgtc
gacctggccgacgcaccgtccctggtcgccgagggctcccccgacgaccccgacgcgccc
ctgccggccggcacgctgccctggcccgacacggccgcgtggacggccgccgtgcgcggc
agcggcatggtcgccgacggtgtcgacggcccggccgaccggccggtgcggtgggtcgac
gggcgcgtgtacctcgaccggtactggcgcgacgagcaggtcgtgcggcgcgacgtcgac
gcgcgcctgacgtcgctgctcgacgtcgacgacgacgcgctgcgccgggccgtgcacgcg
cggttccctcgtgcgcaggacgcgcggcagcgcgtggccgccgcgacggccgcggtgtcg
cgcctcacggtgctcaccggcggcccgggcaccggcaagacgacgaccgtggcgcggctc
gtcgccgtgctgcgcgatgtggccgggccgggcctgcggatcgcgctggccgcgccgacc
ggcaaggccgcgacccggctgcaggaggcggtgaacgccgagctcgcccggctcgacgac
gccgccgtgggcgggaccgtggcggctccgggcgcggcccggccgctgaccgcctcgacg
atccaccgtctgctggggtggcgcccgtcgagcacgcggttcgcacacgaccacgcacac
cggctcccccacgacgtcgtggtgctcgacgaggcgtcaatggtgtccctgccgctgctg
gcgcgcgtgctggacgcgctgcgcccggacgcgcggctcgtgctcgtcggcgacccggac
cagctcgcgtccgtcgaggtcggggcggtgctcggcgacctcgtcgctcgccccacgcgg
tccggtccgctgcccgcacgcctcgcggcgctgctgccggacgacgtgccggggactgcg
acgagcgccgacgacacccgcgacgccgcggccctgcacggcggcgtcgtgcgcctggtc
gtcacgcaccggttcgggcacgagctcgcggagctcgccgacgcggtgcgccgaggtgac
gcggacgcgacgctcgcgctgctgcgggccggcggggcgcacgcgtcgctggtcgagccc
gcggccgaggtgccgacggaggacgaggtgcccgggctgcggggggacgtcagcgcgacg
ggcgcgcgtctcgtcgccgcggcccgcgcgggcgacacggcaggagcgctggaggcgctc
ggggtgcaccgcctgctgctcgcgcaccgccgcgggccggccggggtcgcacgctgggcg
gcgctcgcgcagcgctgggtcgagaagacggtcggcgacctgcagccggggcctctctcg
ctcggtcgccccctgctcgtcaccgtcaacgaccgcacgaccgggctgtcgaacggcgac
atcggcgtcctggtctccgacggtgccggtggggtggtcgcggcgttcggggagtcgcac
gccccgcgcctcgtgcgcccgcaccggctgcctgccgtggagacggtgcacgcgatgacg
gtgcaccgcgcgcagggcagccagttcacgttcgtcaccgtgctgctgccgcccgcgtcg
tcgccgctgctcacgcgcgagctgctgtacaccgcggtcacccgcgcgcaggagcacgtg
cgcgtcgtcgggtccgcggaggccgtccgccgggccgtcgagcgtccggttcgccgtgcg
agcggcctgcgcttcgcgcgctga
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