Entry |
|
Name |
(GenBank) UvrD/REP helicase
|
KO |
|
Organism |
cfl Cellulomonas flavigena
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cfl00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cfla_2854
03430 Mismatch repair
Cfla_2854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cfl03400]
Cfla_2854
Enzymes [BR:cfl01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cfla_2854
DNA repair and recombination proteins [BR:cfl03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cfla_2854
MMR (mismatch excision repair)
Other MMR factors
Cfla_2854
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3169024..3170955
|
AA seq |
643 aa
MRDGRGGSDADRVLAGLDEQQTGAVVAPPGPVRIMAGAGTGKTRTITHRIAYQHLTGAVP
AHGVLAVTHSSRAAGEMRDRLARLGVGGVQARTFHAAALRQLRYFWRATGLPGDGPVLID
ADGPGAQYRYLRGALGAVLRTPARDVDASMVTDLSTELTWAAARDLTPAEYEAQAEAAGR
KPGMRLSTVAGAMRRYTTAKRAAGVLDFADLLATCARLLEDDDEVAATVRQQYAAFVVDE
YQDTDPAQQRLLDAWLGDRDTLAVVGDARQAVYAFKGADTSLLRDFTVRFPHAVTVDLVQ
DYRSTTQVVDVANRLMAGRPESAGPALVGMLGDGPAVQVVQGDDEEDEDARVVATVRRWL
AAGVPPEEIAVLHRFNAQAVALTAALRDAGVPVVAADGQAYFDRREVAHVRALLREHAAR
TPDEDAADVLGQVLARVGHDPDAPPDGTGAARERWDALEALRSLVATLPAALTGTVRALS
ADLDRRAAEDHAPPGRGAVTVSTIHKAKGLEWDAVVVARATEGSLPSVYATTSAETAEER
RLAYVAVTRARRHLVATWAGARRGGRANTASPYLSAFAAPRARAGRADDPPTPRSTSTLT
VGQRVTHDTHGLGRVVDVRDGTVTIDFGTGGRRTVASGRIVTL |
NT seq |
1932 nt +upstreamnt +downstreamnt
gtgcgtgacggacgaggcgggagcgacgcggaccgcgtgctcgccggcctcgacgagcag
cagaccggggccgtcgtcgcgccgcccgggcccgtgcggatcatggcgggtgccggcacg
ggcaagacccgcacgatcacgcaccgcatcgcgtaccagcacctcaccggggctgtcccc
gcgcacggcgtgctggccgtgacgcactcgagcagggcggcgggcgagatgcgcgaccgt
ctcgcgcggctcggcgtcggcggggtgcaggcgcgcacgttccacgccgcggcgctgcgg
cagctgcggtacttctggcgtgcgacaggcctaccgggcgacggtcccgtgctcatcgac
gccgacgggccgggcgcgcagtaccggtacctgcgcggcgcgctcggggcggtgctgcgg
acgcccgcgcgggacgtcgacgcgtcgatggtgacggacctgtcgaccgagctgacgtgg
gccgccgcgcgtgacctcacgcccgcggagtacgaggcgcaggcggaggcggcgggacgc
aagccgggcatgcgcctgtcgacggtcgccggcgcgatgcggcggtacaccacggccaag
cgcgcggccggtgtgctggacttcgcggacctgctggcgacgtgcgcgcggctgctcgag
gacgacgacgaggtcgcggccaccgtgcggcagcagtacgcggcgttcgtcgtcgacgag
taccaggacaccgacccggcgcagcagcggctgctcgacgcgtggctcggcgaccgcgac
acgctcgccgtggtgggtgacgcccggcaggccgtctacgcgttcaagggtgcggacacc
tcgctgctgcgggacttcacggtgcgattcccgcacgccgtgaccgtggacctcgtgcag
gactaccgctcgacgacccaggtggtcgacgtcgcgaaccgcctcatggccgggcgcccc
gagtcggcggggccggcgctcgtcgggatgctcggcgacgggcccgcggtgcaggtcgtg
cagggcgacgacgaggaggacgaggacgcgcgtgtcgtcgcgaccgtccgccggtggctg
gccgcgggcgtgccgcccgaggagatcgccgtgctgcaccggttcaacgcgcaggccgtc
gcgctgaccgccgcgctgcgggacgccggagtccccgtcgtcgcggcggacgggcaggcg
tacttcgaccgtcgcgaggtcgcgcacgtgcgggcgctgctgcgcgagcacgccgcgcgc
acccccgacgaggacgcggccgacgtgctgggccaggtgctggcacgcgtcggccacgac
cctgacgccccgcccgacggcaccggtgccgcccgtgaacgctgggacgccctggaggcg
ctgcgctcgctggtcgcgacactgcccgcggcgctgaccggcaccgtgcgggcgctgtcc
gccgacctggaccgccgcgccgccgaggaccacgcaccgcccggccgcggcgccgtcacc
gtcagcaccatccacaaggccaagggcctggagtgggacgccgtcgtggtcgcgcgcgcc
accgagggctccctgccgtcggtctacgcgacgacgtcggcggagacggccgaggagcgg
cgcctggcgtacgtcgcggtgacgcgggcgcggcggcacctcgtcgcgacgtgggcgggt
gcgcggcggggcgggcgggcgaacacggcgtcgccgtacctgagcgcgttcgcggcgccg
cgggcgcgggccgggcgcgcggacgaccccccgacgccgcggtcgacgtccacgctgacc
gtcgggcagcgggtcacgcacgacacgcacgggctggggcgcgtcgtcgacgtgcgcgac
ggcacggtgacgatcgacttcgggaccggcggacgcaggacggtggcttcgggacgcatc
gtcacgctgtga |