KEGG   Cornus florida (flowering dogwood): 132271385
Entry
132271385         CDS       T11641                                 
Name
(RefSeq) TATA-box-binding protein-like isoform X1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
cflo  Cornus florida (flowering dogwood)
Pathway
cflo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    132271385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cflo03000]
    132271385
   03021 Transcription machinery [BR:cflo03021]
    132271385
Transcription factors [BR:cflo03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    132271385
Transcription machinery [BR:cflo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     132271385
  RNA polymerase III system
    TFIIIB
     132271385
  RNA polymerase I system
    SL1/TIF-1B
     132271385
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 132271385
NCBI-ProteinID: XP_059628721
LinkDB
Position
Unknown
AA seq 201 aa
MADQVVEGSQPVDLSKHPSGIGPTLQNIVSTVNLDCKLDLKAIALQARNTEYNPKRFAAV
ITRIREPKTTALIFSSGKMVCTGAKSEHQSKLAARKYAQIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHCAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYLAFENIYPVLTEFRKNQQW
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcagatcaagtcgtggaagggagccaacccgtcgatctttccaagcatccgtctgga
atcggccccacactacaaaacatagtatctactgtcaacttggattgcaagttggatctt
aaggccattgcactacaagctcgtaacactgaatacaatcccaagcgatttgctgctgtg
atcacgaggatcagagaaccgaaaacgaccgcattaatattttcttctggaaaaatggtt
tgtacaggtgcgaaaagcgagcaccaatcaaaattggcagcacgaaagtatgctcaaatt
attcaaaagcttggttttccagctaagtttaaggatttcaagatccagaacattgtgggc
tcctgtgatgttaaatttcccattagacttgaaggccttgcatactcccattgtgctttt
tctagttatgaaccagagttgttccctggattgatttatcgtatgaagcaaccaaaaatt
gtgctgcttatctttgtttccgggaaaattgttctgacaggagctaaggtgcgcgatgaa
acgtatcttgcatttgaaaacatatacccggtgcttacagagttcaggaaaaatcaacaa
tggtaa

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