Cornus florida (flowering dogwood): 132271387
Help
Entry
132271387 CDS
T11641
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132271387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cflo03000
]
132271387
03021 Transcription machinery [BR:
cflo03021
]
132271387
Transcription factors [BR:
cflo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
132271387
Transcription machinery [BR:
cflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132271387
RNA polymerase III system
TFIIIB
132271387
RNA polymerase I system
SL1/TIF-1B
132271387
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
132271387
NCBI-ProteinID:
XP_059628724
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MADQVLEGSQPIDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYLAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaagtcttggaagggagccaacccattgatctctccaagcatccatctgga
atcgtccctacgctacaaaacatagtatctactgtcaacttggattgcaagttggatctt
aaggccattgcactacaagctcgtaacgctgaatacaatcccaagcgttttgctgctgtg
atcatgaggatcagagaaccgaaaacgaccgcattaatatttgcttctggaaaaatggtt
tgtacgggtgcgaaaagcgagcaccaatcaaaattggcagcacgaaagtatgctcgaatt
attcaaaagcttggttttccggctaagtttaaggatttcaagatccagaacattgtgggc
tcctgtgatgttaaatttcccattagacttgaaggccttgcatactcccatggcgctttt
tctagttatgaaccagagttgttccctggattgatttatcgtatgaagcaaccaaaaatt
gtgctgcttatctttgtttccgggaaaattgttctgacaggagctaaggtgcgcgatgaa
acgtatcttgcatttgaaaacatatacccggtgcttacagagttcaggaaaaatcaacaa
tga
DBGET
integrated database retrieval system