Cornus florida (flowering dogwood): 132271390
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Entry
132271390 CDS
T11641
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132271390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cflo03000
]
132271390
03021 Transcription machinery [BR:
cflo03021
]
132271390
Transcription factors [BR:
cflo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
132271390
Transcription machinery [BR:
cflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132271390
RNA polymerase III system
TFIIIB
132271390
RNA polymerase I system
SL1/TIF-1B
132271390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
132271390
NCBI-ProteinID:
XP_059628730
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MADQVLEVSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFSSGKMVCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHCAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYLAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaagtcttggaagtgagccaacccgtcgatctcaccaagcatccgtctgga
atcgtccctacactacaaaacatagtatctactgtcaacttggattgcaagttggatctt
aaggccattgcactacaagctcgtaacgctgaatacaatcccaagcgatttgctgcggtg
atcatgaggatcagagaaccgaaaacgaccgcattaatattttcttctggaaaaatggtt
tgtacgggtgcgaaaagcgagcaccaatcaaaattggcagcacgaaagtatgctcgaatt
attcaaaagcttggttttccagctaagtttaaggatttcaagatccagaacattgtgggc
tcctgtgatgttaaatttcccattagacttgaaggccttgcatactcccattgcgcattt
tctagttatgaaccagagttgttccctggattgatttatcgtatgaagcaaccaaaaatt
gtgctgcttatctttgtttcagggaaaattgttttgacaggagctaaggtgcgagatgaa
acatatcttgcatttgaaaacatatacccggtgcttacagagttcaggaaaaatcaacaa
tga
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integrated database retrieval system