Cornus florida (flowering dogwood): 132273536
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Entry
132273536 CDS
T11641
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cflo Cornus florida (flowering dogwood)
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cflo03041
]
132273536
Spliceosome [BR:
cflo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132273536
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_ACIN1
RRM_occluded
RRM_10
RL
TGF_beta
Motif
Other DBs
NCBI-GeneID:
132273536
NCBI-ProteinID:
XP_059630477
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAINALQF
YTNVQPTVRGRNVYVQFSSHQELTTMEQNAQGREDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVIFQKSAGFQALIQYQLRQSAVSARNSLQGRNIYDGCCQLDIQFSNLNEL
QVNYNNERSRDFTNPSLPTEQKGRSSQPGYGDAGVGFPQMGNAAAVAAFQGALPPGISGT
NDRCTVLVSNLNPDRVDEDMLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHF
LKGAMLFGKHLEVNFSKHPNITTGADTHEYMNSNLNRFNRNAAKNYRYCCSPTKMIHLSS
LTQDVTEEEIVAHLAEHGTIVNSKLFEMNGKKQALVLFETEEQATEALVCKHASSLGGTM
IRISFSQLQTI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccctctaaagtcattcacgtccgcaatgtgggacatgaaatttctgagaat
gatttgcttcagttattccagccctttggagtcatcaccaagcttgttatgcttcgggct
aaaaatcaggcccttctccaaatgcaagatattccttcagctataaatgccttgcaattc
tacacaaatgttcagccgactgtaaggggaaggaatgtttatgttcaattctcatcacat
caagaactaacaactatggaacagaatgcccaaggacgagaagatgagcctaatcgaatt
ctcttagttacaattcatcacatgctatatcctataaccgtggaagtgctgcatcaagtt
ttttctcctcatggatttgtggagaagatcgtcatatttcagaagtcagctggttttcaa
gcccttatccagtatcagttacgccagagtgctgtttcagcaagaaactctcttcagggg
cggaacatatatgatggttgctgtcagctggatattcagttttcaaacctcaatgagtta
caggtgaactacaataatgagcggtcaagggatttcacaaacccatctctgcctacggaa
cagaagggaagatcctcccaacctggttatggagacgcaggagttgggtttccgcagatg
ggcaatgctgctgccgttgctgcctttcaaggagctttgcctcccggaataagcgggaca
aatgacaggtgtactgttcttgtatctaatctaaatcctgatagagtagacgaggatatg
ctgttcaacttattttccatttatggaaatattgtgagaatcaaacttctccgcaataaa
ccagaccatgcattagttcaaatgggtgacggctttcaggctgaattggcagtacatttt
ctgaagggagccatgttgtttgggaagcatttggaggtgaacttttcaaagcatccgaac
attacaacaggtgctgatacacatgagtacatgaattcaaatctcaaccgcttcaaccgt
aatgctgcaaagaattatcgctattgctgctccccaaccaagatgatccacctgtcttcc
ctcacccaggacgtcaccgaggaagagattgtggcccacctggcagaacatggcaccatt
gtcaatagcaagctctttgagatgaatggtaagaagcaggcccttgtcctgtttgaaact
gaggagcaggccactgaagcccttgtgtgcaagcatgctagctcccttggcggtacaatg
atccgaatttctttttcccagctgcagaccatctaa
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