Cornus florida (flowering dogwood): 132274114
Help
Entry
132274114 CDS
T11641
Name
(RefSeq) protein ALTERED SEED GERMINATION 2 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
cflo
Cornus florida (flowering dogwood)
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cflo04121
]
132274114
Ubiquitin system [BR:
cflo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132274114
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
TRM82_WD
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IP5PC_F
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
132274114
NCBI-ProteinID:
XP_059631265
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MENLCFNDGNITDMIDSRTLSARHDINHSLQMHSSLIRRLSQERELEGHTGCVNAVAWNS
KGSLLISGSDDTRINIWSYSSQKLLHSIETGHATNIFCTKFVPETSDELVVSGSGDAEVR
VFNMSRLKGRGSEEIAIAPSALFQCHTRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREG
ASCPPAGSSHQECRNVLLDLRCGAKKSLADPPKQLLALKSCDISSTRPHLLLVGGSDSFA
RLYDRRMLPPLSSCRKKLSPPPCVNYFCPMHLSDRGRSSLHLTHVTFSPNGEEVLLSYSG
EHVYLMDVNHAGGSAMQYTSGDSSKLVSFTPMLNGVELQSPVYSVLSDGFPSNSNVAARL
NKCRKLVQIAENSLKEDTNYFYGIEACNEVLDGHGSEIGSMLMHECLCIHAALLLKRKWK
NDAHMAIRDCHRARRIDSSSVRALLIQSEALSQLGKHKEALDFAIAALTFAPSDSEVAER
VENLRKHLATAEAEKVSKATDGTHVSEPRAGRVLSLSEILYRSEANSDASQDGPRSERED
SDYDEELELDFETSISGDEGRDVESNILHGSLNLRIHRRGDSATEASCANGSCGSSISPS
QNDRTIYQPESVIDMKQRYVGHCNVGTDIKQASFLGQRGEYVASGSDDGRWFIWEKRTGR
LIKVLHGDGVVVNCVQCHPFDCVVATSGIDSTIKIWTPSASVPSIVSGGATGPETANVLD
IMETNQRRLCRNREAILPFELLERFRMHEFSEGTLHPFECAQS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctctgctttaacgatggcaacatcactgacatgatcgacagtcgaactctc
tccgctcgccatgacattaaccactctttgcaaatgcactcatcgttgatacgaaggctt
tctcaggaaagagaattggaggggcatacgggttgtgttaatgctgtggcttggaattcg
aaagggtcacttctgatatctggttctgatgatacacgaattaacatttggagctattca
agtcaaaagcttttgcactctattgaaactgggcatgctaccaacatattctgtacaaaa
tttgttcctgaaacttctgatgagttagtggtctctggatctggagatgctgaagttcgg
gtttttaatatgtctcgattaaaagggagaggatctgaagaaattgctatagctccatca
gcgctgtttcagtgtcacactaggagagtgaaaaagttggctgtggaagttggaaaccct
aatgtagtatggagtgcaagtgaagatgggactttgaggcagcatgactttcgggagggt
gcatcttgtccaccagctggatcttctcatcaagagtgccgcaatgttttacttgacttg
cggtgtggagcaaagaaatcattagctgatcctcctaagcaattgcttgctctgaaatct
tgtgatatcagttccaccaggcctcatttgctcctcgttggtgggagtgattcgtttgct
cgtttatatgatagacggatgctgcctccactctcatcttgtaggaaaaaattgtcacca
cctccttgtgttaactatttctgcccgatgcatctttctgatcgtggtcgttctagcttg
cacctaactcacgttacatttagtccaaatggagaagaggttcttcttagttacagtgga
gagcatgtatacctaatggatgtaaatcatgctggtggaagtgcaatgcaatatacctcg
ggagattcttcaaaacttgtgagctttactcccatgcttaatggggtagaattgcaatca
ccagtttacagtgtcctctcggatggttttccttcgaatagcaatgttgctgccaggctt
aacaagtgcagaaaattggttcaaattgcggaaaattccttgaaggaggatacaaattat
ttctatggaattgaggcttgcaatgaagttttggacggtcatggttctgagattggatca
atgctaatgcatgaatgtttgtgtatacacgcagccttgttactcaagcggaagtggaaa
aatgatgctcatatggctataagagattgccacagagctaggaggattgattcttcttcg
gtaagggcacttcttatacagtcagaggcgttatcgcagcttggtaaacataaagaagct
ctagactttgctattgcggctctaacttttgctccatctgattctgaagttgcagaaagg
gtggagaatttaagaaagcatcttgctacagccgaagctgagaaagttagcaaggcaact
gacggaacacatgtgtcagaacctcgagctggaagagtactgtcattgagtgaaatactt
taccgttcagaggcaaatagtgatgcttcacaagatggtccaaggtctgaaagagaagat
tctgattacgatgaagagctggagttggattttgaaacgtccatatcaggtgatgaaggg
cgtgatgttgaatccaacattcttcatgggagtttgaatttgagaattcatagaagaggt
gattcagctaccgaggcaagttgtgcaaatggctcttgtggatcatctatatctccatcc
caaaatgatagaacgatttatcagcctgagtcggtgatagatatgaagcagagatatgtt
ggccactgtaatgtagggactgatataaaacaggctagttttctcggccagagaggtgaa
tatgttgctagtggaagtgatgatggtagatggtttatctgggaaaagagaactggaaga
ctaataaaagtgcttcatggagatggagttgttgtgaactgtgtgcagtgccatccattt
gattgcgttgttgccaccagtgggattgatagcactataaagatttggactccaagtgca
tctgtcccatccattgtcagtggtggagctactggaccagagactgcaaatgtgttagat
attatggaaaccaatcagcgcagattatgccgtaatcgtgaagcaatcttgccctttgag
ctattggagcggtttcgaatgcacgagtttagcgaaggaaccctacatccgtttgaatgt
gcacagagctaa
DBGET
integrated database retrieval system
