Cornus florida (flowering dogwood): 132275279
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Entry
132275279 CDS
T11641
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132275279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cflo03019
]
132275279
03009 Ribosome biogenesis [BR:
cflo03009
]
132275279
04131 Membrane trafficking [BR:
cflo04131
]
132275279
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cflo04147
]
132275279
Messenger RNA biogenesis [BR:
cflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132275279
Ribosome biogenesis [BR:
cflo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132275279
Membrane trafficking [BR:
cflo04131
]
SNARE
SNARE associated proteins
Others
132275279
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132275279
Exosome [BR:
cflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132275279
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_2
AAA_16
AAA_5
AAA_33
AAA_14
AAA_22
TIP49
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_17
nSTAND3
AAA_28
Parvo_NS1
nSTAND_NTPase5
AAA_18
ATPase_2
Vps4_C
ABC_tran
NB-ARC
AAA_7
Viral_helicase1
NACHT
AAA_lid_PRS2_C
TsaE
IstB_IS21
DUF815
ResIII
Zeta_toxin
AAA_24
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
132275279
NCBI-ProteinID:
XP_059632723
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MTDPNSSAPDNVQSSSSTTSKSNKRDYSTAILERKKSPNRLIVDEAINDDNSVVSMHPTQ
MEALQLFRGDTVLIKGKKRKDTVCIAITDEECEEPKIRMNKVVRANLRVRLGDVVSVHQC
PDVKYGKQVHILPIDDSVEGLTGNLFDVYLKPYFLESYRPVRKGDLFIVRGGMRSVEFKV
VETDPGEYCVVAPDTEIFCGGEPIKREDEERLNEIGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNL
RKAFVEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVMGA
TNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERVSKDTHGY
VGADLAALCTEGALQCIREKMDVIDLEDETIDVEILNSMAVTNEHFQTALGASNPSALRE
TVVEVPNVSWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR
GNSRGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP
LPDEASRLQIFKACLRKSPISKHVDLSALARYTHGFSGADITEISQRACKYAIREDIEKD
IGRKRKRMENPEMMEEDDVDDVPEIKAGHFEESMKYARRSVSDADISKYQRFAQTLQQSR
GIGSEFRFSDHAARTVGTADPFASATGAGDDEDLYN
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcctaactcatccgctccagacaatgttcagtcttcttcatctacaacttcg
aaaagtaataagagagattattccactgctattttggaacgcaagaagtcccccaaccgt
cttattgttgacgaagccataaatgatgataattctgtggtttccatgcaccctactcaa
atggaagctcttcagctctttcgaggagacacagttttgatcaaggggaagaaacgaaaa
gatacagtatgcattgctattaccgatgaagaatgtgaagaacccaaaattagaatgaac
aaagttgttagagctaacctcagggtacgccttggagatgttgtgtctgtccaccaatgt
cctgatgtgaagtacggaaagcaggttcacattcttcctattgatgactccgttgaaggt
cttacaggcaacttgtttgacgtatacctgaagccatatttcttagaatcttaccgacct
gtgaggaagggtgaccttttcatagttagaggtggaatgcgcagtgtggaattcaaagta
gttgagacagatcccggtgaatattgtgttgttgcaccggatacagagatcttttgcgga
ggagaacccatcaagcgcgaggatgaggagagattgaatgaaattggctatgatgatgta
ggcggtgtaaggaagcaaatggctcagatccgtgagctagtagaacttcctctaaggcac
ccacagctcttcaagtcaattggtgtgaagcccccaaaaggtatcttgctttatgggcca
cctgggtctggaaaaactctgattgctagagctgtagctaatgagactggtgcatttttc
ttcttaataaatgggcctgaaataatgtcaaagttggctggtgagagtgaaagcaacttg
aggaaggcatttgtggaagctgagaagaatgccccatctattatctttattgatgagata
gattccattgctccaaagcgggaaaagacacacggtgaagtggagaggcgtatagtatcc
caactcctgaccttgatggatggcctcaaggcacgagctcatgtgattgtcatgggggct
acgaacaggcccaacagtattgaccctgctctgaggagatttggtagatttgatcgagag
attgacattggtgtaccagatgaagtggggagattggaagttcttcggatccatacaaaa
aatatgaaacttgctgaagatgttgatcttgaaagagtttcgaaagatacgcatggttat
gttggtgcagatcttgctgctctatgcacagaaggtgctcttcaatgtataagggagaaa
atggatgtgattgatttagaggatgagacaattgatgttgaaatattgaattccatggct
gtgactaatgagcacttccaaactgcattgggggcttcgaatccatcagccttgcgtgaa
acagttgtggaggttcctaatgtcagctgggaggatattggtggattggacaatgttaag
agagagcttcaagagactgtccaatatccagtcgagcatccagagaagtttgaaaaattt
ggcatgtcaccttctaaaggagttctcttttatggacctcctggctgtggcaagactcta
cttgccaaagcaattgctaacgaatgtcaagccaacttcataagtgtcaaaggacctgag
ttactgacaatgtggttcggagaaagtgaggccaacgttcgagagatatttgacaaggca
cgtcagtcggctccgtgtgtacttttctttgatgagcttgattccattgccactcagcgt
ggcaactcgagaggagatggagggggtgctgctgatagagttttaaaccaactattgaca
gaaatggatgggatgaatgcgaagaaaacagttttcatcataggggcaacaaataggcca
gatattattgattcggcattgctcaggcctggacgtcttgatcagttgatttacatccca
ctaccggatgaagcttcccgtcttcagatcttcaaagcatgtttgcgcaaatctccaatc
tccaagcatgttgacctgtcagctcttgcacggtacacacatggatttagtggtgcagat
ataactgaaatttctcagcgtgcctgcaaatatgccatcagagaagatattgagaaggat
attggaaggaagagaaaaaggatggagaaccctgaaatgatggaagaagatgatgttgat
gatgtccccgagattaaggcaggtcactttgaggagtcgatgaaatatgcccgacgaagt
gtcagtgatgcggacattagcaagtatcaacgttttgctcaaactttacagcaatctcgt
ggaattggatctgagtttcggttctcagatcatgctgcaaggacagttggaactgcagac
ccctttgcttctgccactggtgctggcgatgatgaagacctgtacaactga
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integrated database retrieval system
