Cornus florida (flowering dogwood): 132283298
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Entry
132283298 CDS
T11641
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cflo
Cornus florida (flowering dogwood)
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cflo03019
]
132283298
03041 Spliceosome [BR:
cflo03041
]
132283298
Messenger RNA biogenesis [BR:
cflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132283298
Spliceosome [BR:
cflo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132283298
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_7
RRM_PARP14_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
132283298
NCBI-ProteinID:
XP_059641219
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MQHQRLKQQQALMQQAALLQQQSMYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HTQVTEPLIQEVFSSTGPVEGCKLIRKDKSSYGFIHYFDRRSAVLAIMSLNGRHLFGQPI
KVNWAYASGQREDTSSHYNIFVGDLSPEVTDAMLFACFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGLNDDKQSSDAKSVVELTNGSS
EDGKETANNDAPENNPQYTTVYVGNLAQEVTQLDLHRHFHALGAGVIEEVRVQRDKGFGF
VRYSTHAEAALAIQMGNTQSLLCGKQIKCSWGSKPTPPGTSSNPLPPPAPAPLPGFSATD
LLAYERQIAMSKMGAVHALMQPQGQHPLKQAAMGMGAAGASQAIYDGGFQNVAAAQQLMY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcagaggctgaagcaacaacaggccttgatgcaacaagcagctctacttcag
caacagtccatgtaccatcctggcctcttggctgctcctcagattgagccaatcccaagt
ggaaatctgcctcctgggtttgatccaagtacatgccgcagtgtgtatgtgggaaacatc
catacacaggtgacagaaccgcttattcaggaggtattctcgagtactggtcctgtagaa
ggctgcaagcttataagaaaggacaagtcatcctatgggttcattcactattttgatcgt
agatcagctgtgctagctataatgtcacttaatggaaggcacttgtttgggcagcctatc
aaagttaattgggcatatgctagtggacaaagggaggacacatcaagtcattacaacatt
ttcgttggtgatctcagccctgaggttactgatgctatgctatttgcgtgcttctctgtt
tatcctagttgctctgatgcaagggttatgtgggatcagaagactgggcgttcaagaggg
tttggatttgtttccttccggaatcaacaggatgctcagagtgcgataaatgacttgact
ggtaagtggcttggaagtaggcagatacgttgtaactgggctacaaagggtgctggtctt
aatgatgacaaacagagttcagatgccaaaagtgtggtggaattaacaaatggttcttca
gaagatggcaaagagacggcaaataatgatgctcctgagaataacccccaatacacaacc
gtatatgtgggcaatcttgctcaagaggtcactcagcttgatctccatcgccacttccat
gctcttggtgctggagtcattgaggaagtcagggtccagcgtgataaaggatttggtttt
gttagatacagtacccatgcagaggcagctctggccattcagatgggaaatacacagtcg
cttctctgtggcaaacaaattaagtgctcatggggcagcaagcccactccaccaggaaca
agttcaaatccacttccccctcctgcacctgcacctttgcctggtttttcagccactgac
cttttggcctatgagcggcagatagcaatgagcaagatgggtgccgtgcatgccctcatg
caaccccaagggcagcatcccctcaagcaggcagctatgggaatgggtgccgccggagcc
agccaggctatttatgatggcggtttccagaatgttgctgctgcccagcagctcatgtac
taccagtaa
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