Cornus florida (flowering dogwood): 132283332
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Entry
132283332 CDS
T11641
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo03420
Nucleotide excision repair
cflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132283332
09124 Replication and repair
03420 Nucleotide excision repair
132283332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cflo03051
]
132283332
03400 DNA repair and recombination proteins [BR:
cflo03400
]
132283332
Proteasome [BR:
cflo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
132283332
DNA repair and recombination proteins [BR:
cflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132283332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
CUE
Rad60-SLD
UBA_RAD5A
UBA_3
TECR_N
UBA_Ucp12
AAA_35
AIRC
Ubiquitin_2
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
132283332
NCBI-ProteinID:
XP_059641255
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVEGKDNYPCGQQLLIHNGKVLKDESTLA
ENKVTEDGFLVVMLSKSKTLGSSSVSSAQPSSTTAPTSNPTPAPEAPIQAPVQAPAPKNI
TSTSDVATARAPSDTYGQAASNLVAGNNLEQTIQQIMDIGGGNWEKETVIRALRAAYNNP
ERAVDYLYTGIPEAAEVAVPVASGANTMAGTGAAPTAPVSGVPNSSPLNLFPQETLSGAA
AGGLGSLDFLRNNQQFQALRSMVQGNPQILQPMLQELGKQNPQLLRLIQEHQAEFLQLIN
EPLEGSEGDLFDQPEQDMPHAVSVTPEEQEAIERLEAMGFDRALVIEAFLACDRNEELAV
NYLLENAGDYED
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcactgtaaagactttgaaaggcagtcattttgaaattagggttcagccctcc
gacaccattatggcagttaagaaaaacattgaagatgtggaaggaaaagataattatcca
tgtggacaacaattattgattcacaatgggaaggttttgaaagatgaaagtactctggca
gagaacaaggtcactgaagatggttttcttgttgtcatgcttagcaagagtaaaactttg
ggctcaagtagtgtctcatccgcccagccttcatctacaacagcaccaacttctaatcct
actccggcgcctgaagctcctatacaagctcctgtacaagctccggccccaaagaacatt
acatctacttcagatgtggcaacagctagggcaccttctgatacgtatggtcaagctgct
tccaatttagtggctggtaataatcttgagcagactattcaacaaattatggatataggt
ggtggcaactgggaaaaggaaaccgttatccgtgcacttagagctgcttacaacaatcca
gagcgggctgtggattacttatatactggtattccagaggcagcagaagttgcagtgcca
gtggctagtggggctaacaccatggctggaacaggtgcagcacctaccgcccctgtctct
ggagtgcctaattcatctcccttgaatctgtttcctcaggaaacactttctggtgctgct
gctggtgggcttggatccctcgatttccttaggaataaccaacagttccaagcattgcgg
tcaatggtgcaaggaaacccacaaattttacagcccatgcttcaggagctaggaaagcag
aaccctcaacttttaagactaattcaagagcaccaggcggagtttcttcagttgataaat
gagcctcttgaaggttctgaaggggatttatttgatcagccagagcaggacatgcctcat
gctgttagtgtcactccagaggagcaggaggcaattgaacgacttgaggcaatgggattt
gatagagcccttgtcattgaggcatttttagcctgtgaccgcaatgaggaattggcagtc
aactaccttttagagaatgctggagattatgaagattga
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integrated database retrieval system
