Cornus florida (flowering dogwood): 132284410
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Entry
132284410 CDS
T11641
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cflo
Cornus florida (flowering dogwood)
Pathway
cflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132284410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cflo03019
]
132284410
03009 Ribosome biogenesis [BR:
cflo03009
]
132284410
04131 Membrane trafficking [BR:
cflo04131
]
132284410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cflo04147
]
132284410
Messenger RNA biogenesis [BR:
cflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132284410
Ribosome biogenesis [BR:
cflo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132284410
Membrane trafficking [BR:
cflo04131
]
SNARE
SNARE associated proteins
Others
132284410
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132284410
Exosome [BR:
cflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132284410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_14
AAA_22
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
Vps4_C
Parvo_NS1
AAA_18
ATPase_2
nSTAND_NTPase5
NB-ARC
ABC_tran
Viral_helicase1
NACHT
AAA_7
AAA_lid_PRS2_C
TsaE
IstB_IS21
ResIII
DUF815
Zeta_toxin
AAA_24
Zot
Molydop_binding
PET117
Motif
Other DBs
NCBI-GeneID:
132284410
NCBI-ProteinID:
XP_059642511
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MADPNSSAPDNIQCSSSKSNKRDYSTAILERKKSPNRLIVDEAINDDNSVVSMHPTKMEA
LQLFRGDTVLIKGKKRKDTVCIAIADEECEEPKIRMNKVVRANLRVRLGDVVSVHQCPDV
KYGKRVHILPIDDSVEGLTGNLFDVYLKPYFLESYRPVRKGDLFMVRGGMRSVEFKVVET
DPGEYCVVAPDTEIFCGGEPIKREDEERLNEIGYDDVGGVRKQMAQIRELVELPLRHPQL
FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA
FEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARAHVIVMGATNR
PNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGA
DLAALCTEGALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGASNPSALRETVV
EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK
AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNS
RGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPD
EPSRLQIFKACLRKSPISKDVDLSALARYTHGFSGADITEISQRACKYAIREDIEKDIER
QRKKMENPEAMEEDDIDDVPEIRAAHFEESMKYARRSVSDADIRKYQRFAQTLQQSRGIG
SEFRFSDHAARTVGTADPFASAPGADDDEDLYN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctaactcatccgccccagacaatattcagtgttcttcatcgaaaagtaat
aagagagattattccactgctattttggaacgcaagaagtcccccaaccgtcttattgtc
gacgaagccataaatgatgataattctgtggtttccatgcaccctactaaaatggaagca
cttcagctctttcgaggagatacagttttgatcaaggggaagaaacgaaaagatacagta
tgcattgctattgccgatgaagaatgtgaagaacccaaaattagaatgaacaaagttgtt
agagctaacctcagggtacgccttggagatgttgtgtctgtccaccaatgtcctgatgtg
aagtacggaaagcgggttcacattcttcctattgatgactcagttgaaggtcttacaggc
aacttgtttgatgtatacctgaagccatatttcttggaatcttaccgacctgtgagaaag
ggtgaccttttcatggttagaggtggaatgcgcagtgtggaattcaaagtagttgagaca
gatcccggtgaatattgtgttgttgcaccagatacagagatcttttgcggaggagaaccc
atcaagcgcgaggatgaggagagattgaatgaaattggctatgatgatgtaggtggtgta
aggaagcaaatggctcagatccgtgagctagtagaacttcctctaaggcacccacagctt
ttcaagtcaattggtgtgaagcccccaaaaggcatcttgctttatgggccacctgggtct
ggaaaaactctgattgctagagctgtagctaatgagactggtgcctttttcttcttaata
aatgggcctgaaataatgtcaaagttggctggtgagagtgaaagcaacttgaggaaggca
tttgaggaagctgagaagaatgccccatctattatctttattgatgagatagactccatt
gctccaaaaagggaaaagacacacggtgaagtggagaggcgtatagtatcccaactcctg
accttgatggatggcctcaaggcacgagctcatgtgattgtcatgggggctacaaacagg
cccaacagtattgaccctgctctgaggagatttggtagatttgatcgagagattgacatt
ggtgtaccagatgaagtggggagattggaagttcttcggatccatacaaaaaatatgaaa
cttgctgaagatgttgatcttgaaagagtttcgaaagatacgcatggttatgttggtgca
gatcttgctgctctttgcacagaaggtgctcttcaatgcatcagggagaaaatggatgtg
attgatttagaggatgagacaattgatgctgaaatattgaattccatggctgtgactaat
gagcacttccaaactgcattgggggcttcgaatccgtcagccttgcgtgaaacagttgtg
gaggttcctaatgtcaactgggaggatattggtggattggaaaatgttaagagagagctt
caagagactgtccaatatccggtcgagcatccagagaagtttgaaaaatttggcatgtca
ccttctaaaggagttctcttttatggacctcctggctgtggcaaaactctccttgccaaa
gcaattgctaatgaatgtcaagccaacttcataagtgtcaaaggacctgagttgctgaca
atgtggttcggagaaagtgaggccaacgttcgagagatatttgacaaggcacgtcagtcg
gctccatgtgtacttttctttgatgagcttgattccattgccactcagcgcggcaactcg
agaggagatggagggggtgctgcagatagagttttaaaccaactattgacagaaatggac
gggatgaatgcgaagaaaacagttttcatcataggggcaacaaataggccagatattatt
gattcggcattgctgaggcctggacgtcttgatcagttgatttacatcccactaccggat
gaaccttcccgtcttcagatcttcaaagcatgtttgcgcaaatctccaatctccaaggat
gttgacctgtcagctcttgcacggtacacacatggatttagtggtgcagatataactgaa
atttctcagcgtgcctgcaaatatgccatcagagaagatattgagaaggatattgaacga
cagagaaagaagatggagaaccctgaagcaatggaagaagatgatatcgatgatgtcccg
gagattagggcagctcactttgaggagtcgatgaaatatgcccgacgaagtgtcagtgat
gcggacatcaggaagtaccaacgttttgctcaaactttacagcaatctcgtggcattgga
tctgagtttcggttctcagatcatgctgcaaggacagttggaactgcagacccctttgct
tctgcgcctggtgctgacgatgatgaagacctgtacaactga
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integrated database retrieval system
