Cornus florida (flowering dogwood): 132284817
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Entry
132284817 CDS
T11641
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132284817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cflo03019
]
132284817
03110 Chaperones and folding catalysts [BR:
cflo03110
]
132284817
03029 Mitochondrial biogenesis [BR:
cflo03029
]
132284817
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cflo04147
]
132284817
Enzymes [BR:
cflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132284817
Messenger RNA biogenesis [BR:
cflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132284817
Chaperones and folding catalysts [BR:
cflo03110
]
Heat shock proteins
HSP60 / Chaperonin
132284817
Mitochondrial biogenesis [BR:
cflo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132284817
Exosome [BR:
cflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132284817
Exosomal proteins of other body fluids (saliva and urine)
132284817
Exosomal proteins of breast cancer cells
132284817
Exosomal proteins of colorectal cancer cells
132284817
Exosomal proteins of bladder cancer cells
132284817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF8753
Motif
Other DBs
NCBI-GeneID:
132284817
NCBI-ProteinID:
XP_059642929
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MYRVAASLASSFRSPTSRKLLCSRVICSRDYAAKDIIFGSGARAAMLSGVNELAEAVKVT
MGPKGRNVIIEKSHGDPKVTKDGVTVAKSINFNEKAKNVGADLVKQVANATNNAAGDGTT
CATVLTQAIFTEGCMSVAAGVNVMDLRSGINMAVDAVIADLKSRAKMISTPKEITQVATI
SANGEREIGELLARAMEKVGKEGVITVADGNTLDNELDVVEGMKLARGYISPYFITDGKT
QKCELENPLILIHDKKVSDMNSLVRILELAITKNRPLLIVAEDVEGDALAMLIINKHRAG
VKVCAIKAPGFGDNRRANLDDLAIFTGAEVFNEEHGLSLDKVQIDMLGTAKKVTVSLDDT
IILNGAGDKKMIEERCEQLRAAIEKITATFDKEKAQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYATKVLKSLRTANYDQKRGVQIIENALKAP
TFTIVSNAGGDGALVLGKLLEQDDLNLGYDAAKGKYVNMVEAGIIDPLKVVRTALVDAAS
ISLLLTTTEAIVVDRLGEVNPLANRMPNMDDMGY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgagtcgctgcttccttagcttcatcgttcaggtcccctacttccaggaaactg
ttatgcagtagggttatatgtagcagagattatgctgcaaaggatatcatttttgggagt
ggggctcgtgcagccatgctaagtggtgttaacgagcttgccgaggctgttaaggttaca
atgggtcccaagggtcgtaatgtgattattgagaaaagccatggggatcctaaggtaaca
aaagatggtgtcactgtagccaaaagcatcaatttcaatgaaaaagctaaaaatgttggt
gctgatcttgtaaagcaagttgcgaatgctactaataatgctgcaggagatggtaccact
tgtgccacagtcttgactcaggcaatattcactgaaggttgcatgtcagtagctgctggt
gtaaatgtgatggatttgcgaagtggtattaacatggcagttgatgctgttatagctgac
ttgaagagcagagcaaagatgataagcacacccaaagaaattacgcaggtggccactatt
tctgctaatggtgagcgtgagattggggaacttctagcacgggcaatggagaaagttgga
aaggaaggagtcattaccgttgctgacggaaacactttggataatgaattggatgtagtg
gaggggatgaaactagctaggggttatatatctccatatttcattactgatgggaagacc
cagaaatgtgaactggaaaatcccctgatccttatccatgacaagaaagtttcagacatg
aactcacttgtgagaatattagagctagctataacgaaaaatcgcccactcttaattgtt
gctgaggatgtagagggtgatgcactagcgatgcttattatcaacaagcatcgtgctggg
gttaaggtttgtgccattaaagctcctggttttggggataacagaagagccaatttggat
gaccttgccatttttactggagcagaggttttcaatgaagaacatggtttaagtcttgac
aaagttcaaattgatatgcttggtacagcaaaaaaggtcactgtttctcttgatgacact
ataattctaaatggggctggtgacaagaagatgattgaagaaagatgtgagcagctgagg
gcagccattgagaaaattactgccacgtttgacaaggagaaagcacaggagcggttgtca
aagctatctggcggtgttgcggttttcaaggttggaggagctagtgaggcagaagtcgga
gaaaggaaagatagggttacagatgcactaaatgctacaagagcagctgtggaggagggc
attgttccaggcggtggtgttgctctcttgtatgccacaaaagttctgaagagccttcga
actgcaaattatgaccagaaaagaggagtccaaattattgagaatgctcttaaggctcct
actttcacaattgtttcaaatgctggtggtgatggtgccctggttcttggcaagctattg
gaacaagatgatcttaatttgggttatgatgctgccaaaggtaagtatgttaacatggtg
gaggctgggataatagatcctctcaaagttgtcagaacagcgttagtagatgctgccagt
atctcgttgctattgacaaccaccgaggcaattgttgtggatcgtctgggggaggtaaac
ccacttgcaaatcgaatgccaaatatggatgacatgggctactga
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