KEGG   Cornus florida (flowering dogwood): 132293729
Entry
132293729         CDS       T11641                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
cflo  Cornus florida (flowering dogwood)
Pathway
cflo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    132293729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cflo03000]
    132293729
   03021 Transcription machinery [BR:cflo03021]
    132293729
Transcription factors [BR:cflo03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    132293729
Transcription machinery [BR:cflo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     132293729
  RNA polymerase III system
    TFIIIB
     132293729
  RNA polymerase I system
    SL1/TIF-1B
     132293729
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 132293729
NCBI-ProteinID: XP_059647310
LinkDB
Position
Unknown
AA seq 200 aa
MADQVLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLELKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggatcaagtcttggaagggagccaacctgtggatctttccaagcacccgtctggc
atcgttcctactcttcaaaacatagtctcaacggtcaacttggattgcaagttggaactt
aaagccattgcactgcaagcccgaaatgcagagtataatcccaagcgttttgctgctgtt
attatgaggataagagaaccaaagactacggctttgatttttgcctctgggaagatggtt
tgcactggagctaagagcgaacaacagtcaaaactggctgcaaggaagtatgcacgtatt
attcaaaaacttgggtttcctgccaagttcaaggacttcaagattcagaacatagttggc
tcctgtgatgtgaagtttcctatcagacttgaagggctagcatattcccatggtgccttt
tcaagttatgaaccagaattatttccaggccttatatatcgtatgaagcaaccgaagatc
gtgcttctcatatttgtgtcggggaagattgttcttactggagcaaaggtgagagatgag
acatatactgcttttgagaacatctaccccgtccttacagagttcaggaagaaccagcaa
tga

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