Cornus florida (flowering dogwood): 132294329
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Entry
132294329 CDS
T11641
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo03082
ATP-dependent chromatin remodeling
cflo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132294329
03083 Polycomb repressive complex
132294329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cflo03036
]
132294329
Chromosome and associated proteins [BR:
cflo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
132294329
Histone modification proteins
HAT complexes
HATB complex
132294329
HDAC complexes
Sin3A-HDAC complex
132294329
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
132294329
PRC2.2
132294329
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
132294329
Heterochromatin formation proteins
Other heterochromatin formation proteins
132294329
Chromatin remodeling factors
NuRD complex
132294329
NuRF complex
132294329
NuRF complex (fruit fly)
132294329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
CAF1C_H4-bd
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
DSE1_N
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
Beta-prop_NOL10_N
Beta-prop_HPS5
MIOS_WD40
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
132294329
NCBI-ProteinID:
XP_059648127
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MGKDEDEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSDFGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSQFKQGHLLSGSDDAQICLWDINATPKNKALDAMQIYKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLHIWDLRTPLASKPIQSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPGDES
TKGTT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacgaggatgagatgaggggagagatagaggagagactgataaacgaagag
tacaagatatggaagaagaacactccctttttgtacgatttggtgattacccatgccctc
gagtggccttccctcaccgtcgagtggcttcccgaccgggaagagccgccgggaaaggac
tactctgtgcagaagatgattctggggacccacacctccgagaacgagcccaactatctc
atgctcgcccaggtccagctccctctcgaggacgccgagaacgatgcgcgtcattatgac
gacgaccgctccgatttcggcggcttcggttgcgccaatggcaaggtgcaaataatccag
caaataaatcatgatggcgaggttaatcgggctcgttatatgccacaaaacccatttatt
attgccaccaaaacagttagtgcagaagtttatgtttttgattatagcaaacacccatct
aagcctcctctagatggtgcatgcagcccagatttgaggttgaggggccacagcactgaa
ggatacggtttatcatggagtcagttcaagcagggtcatttattgagtggttctgatgat
gcccaaatatgcttgtgggacattaatgcgactcctaagaataaggcattagacgctatg
caaatatataaggttcatgaaggtgttgtagaggatgtagcctggcatctgaggcatgaa
tacttatttggttctgttggggatgatcaatacctgcatatatgggatcttcggactcca
ttagccagcaagcccattcaatccgtaattgctcatcaaagtgaggtaaattgcttggct
ttcaacccttttaatgaatgggttgtggcaacggggtctaccgataagactgttaagtta
tttgacctacgcaagatctccactgctctccacacatttgattgtcacaaggaggaggtt
tttcaagttgggtggaatccaaagaatgagaccatcttagcttcttgttgtcttggtagg
agacttatggtgtgggatcttagcaggattgatgaagagcagacaccagaggatgccgaa
gatggtccacccgaattgctcttcattcatggtggtcatacgagtaaaatttcagatttc
tcatggaatccatgtgaagattgggtcattgccagcgtagcggaagataacattcttcag
atctggcagatggccgagaacatctaccacgatgaagatgatctaccaggagatgaatcc
acaaaaggtaccacctag
DBGET
integrated database retrieval system
