Cornus florida (flowering dogwood): 132294606
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Entry
132294606 CDS
T11641
Name
(RefSeq) autophagy-related protein 18a-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
cflo Cornus florida (flowering dogwood)
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cflo04131
]
132294606
Membrane trafficking [BR:
cflo04131
]
Autophagy
Other autophagy associated proteins
Others
132294606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
CFAP251_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_RSE1_2nd
Beta-prop_Vps41
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
132294606
NCBI-ProteinID:
XP_059648502
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MTTTTTTLSSPSPPWSLPSISSPNSDPDPNPNCLLANNPSNSPNMAQNSPAPPSSSSDCS
DQYYQTLEENPSFSDLGDAPSTIYGDLNSDDERQSLPDNSAEVPPFTENPNPDLSLPSPP
APSLLYLSFNQDSGCFAAGTDRGFRIYNCDPFREIFRREFDNGGGIGVVQMLFRCNILSL
VGGGPEPQYPLNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRIVVILVQKIFVYNFADL
KLLHQIETISNPKGLCEVSHVSGSMVLVCPGLQKGQVRVEHYALKRTKFIMAHDSRIACF
ALTQDGRLLATASSKGTLVRIFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDK
GTVHVFSLKVDSGSLGIERQRSTPEPNVSTPQAVSSLSFIKGRPLRPVLTGASLSLRCVL
PKYFSSEWSVAQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCEFDPEAGGEMTQLEYY
NFLKPEETF
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaccaccacaaccctctcttccccttctcctccctggtctctcccttcaatt
tcaagccctaattctgaccctgaccctaaccctaattgcttactcgccaataatccttca
aactcacccaacatggcacagaactctcctgctcctccctcctcttcctccgactgctcc
gaccaatactaccaaacccttgaagagaatccatctttttccgatctcggcgacgcgcct
tccaccatatacggcgatctcaactctgacgacgaacgccaatctctccccgataactcc
gccgaagtcccaccctttaccgaaaaccctaaccctgatttatccctaccttcccctcca
gccccgtctctcctctacctctccttcaaccaggactccggctgcttcgccgccggaacc
gatcgcggcttccgcatatacaattgcgacccatttcgcgagattttccggcgagaattc
gacaatggaggcggtatcggcgtcgtgcagatgctgttccggtgcaacattctctcgctg
gtcggtggagggccggaaccgcagtacccgttgaacaaggtcatgatttgggacgaccat
cagagccggtgcatcggcgagctgtcgttccgttctgaggtcaaagcggtgaggctcaga
cgggaccgaattgtggtgattttggtgcagaagatctttgtgtataattttgcggacttg
aaattgttgcatcaaatcgagacaatatcaaaccctaagggtctctgtgaggtgtcgcac
gtttcgggatcgatggtgttggtgtgcccagggttgcagaaggggcaggttagggttgag
cattatgcattgaagcggaccaagtttataatggctcatgattcgaggattgcgtgcttc
gcgcttacacaggatgggcggttgctagctacagcgagtagtaaggggaccctggttcgg
atattcaatacattggatggttcactgcttcaggaggtaaggagaggtgcagatagagca
gagatttacagccttgcattctctcctactgcccagtggctagctgtttcaagtgataag
ggaactgtccatgtcttcagcttaaaggttgattctggatcgctaggaattgaaagacag
cgcagtacacctgaaccaaatgtctctactccacaagctgtgtcttctctctccttcatt
aaaggtcgccctcttcgtcctgttttgaccggcgcatctctaagtctccgatgtgtgctg
ccgaaatatttcagctcagagtggtctgtggctcagtttcgcttgcatgaaggttctcag
tacattgttgcctttggtcaccaaaagaacacagtcgtgattctcggaatggatgggagc
ttctacagatgcgagtttgatccggaggctggtggagagatgactcagctggaatattac
aattttctaaagccggaagaaactttttga
DBGET
integrated database retrieval system
