Cornus florida (flowering dogwood): 132296651
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Entry
132296651 CDS
T11641
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha-like
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132296651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cflo03021
]
132296651
03400 DNA repair and recombination proteins [BR:
cflo03400
]
132296651
Enzymes [BR:
cflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132296651
Transcription machinery [BR:
cflo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
132296651
DNA repair and recombination proteins [BR:
cflo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
132296651
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
132296651
NCBI-ProteinID:
XP_059650815
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKIQHEYSTIVGIQESVHEILMNLKEIVLRSTLYGTCDASICVKGPGYVTAQD
IISPPYVEIVDNTQYIASLTEPIDLCIGLQIERNRGYRIKPPNNFQDGNYPIDAVFMPVR
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLE
DNQHKVTLPTFTFHDKLAKLRKNKKKIAFKYIFIDQSELSPRIYNCLKRSNIYTLLDLLN
NSQEDLMKMKDFRIEDVKEILDILEKRFATDLLKNRF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaacagtatctactcggacactacagtggaagtgtgttgaatca
agagcagacagtaagcgtctttattatggacgctttattctgtctccacttatgaaaggc
caagccgacacaataggcattgcgatgcgaagagctttgcttggagaaatagaaggaacg
tgtatcacacgcgcaaaatctgagaaaatacaacacgaatattctaccatagtaggtatt
caagaatcagtacatgaaattttaatgaatttgaaagaaattgtattgagaagtacttta
tatggaacttgtgacgcgtctatttgtgtcaagggtcccggatatgtaactgctcaagat
atcatctcaccgccttatgtggaaatcgttgataatacccagtatatagctagcttgacg
gaacccattgatttgtgtattggattacaaatcgaaaggaatcgcggatatcgtataaaa
ccgccaaataactttcaagacggaaattacccgatagatgctgtattcatgcctgttcga
aatgcgaatcatagtattcattcttatgggaatgggaatgaaaagcaagagatacttttt
cttgaaatatggacaaatggaagtttaactcctaaagaagcacttcatgaagcctcccgg
aatttgattgatttatttattccttttttacatacggaagaagaaaacttacatttagag
gacaatcaacacaaggttactttacccacttttacctttcatgataaattagctaaacta
aggaaaaacaaaaaaaaaatagcattcaaatatatttttattgaccaatcagaattatct
cccagaatctataattgcctcaaaaggtccaatatatatacattattggaccttttgaat
aacagtcaagaagatcttatgaaaatgaaagattttcgcatagaagatgtaaaagagata
ttggacattctagaaaagcggttcgcaaccgatttactgaaaaataggttttaa
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