Cornus florida (flowering dogwood): 132298981
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Entry
132298981 CDS
T11641
Name
(RefSeq) uncharacterized protein LOC132298981
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
cflo Cornus florida (flowering dogwood)
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cflo04131
]
132298981
Membrane trafficking [BR:
cflo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
132298981
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_RSE1_2nd
Beta-prop_WDR3_1st
Beta-prop_NOL10_N
Beta-prop_HPS5
RgpF
Motif
Other DBs
NCBI-GeneID:
132298981
NCBI-ProteinID:
XP_059651371
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MYIAYGWPQVIPLESGLCPASQQIIYLKVINRLLLVVAPSHFELWSSSQHKVRLGKYKRD
SDSIQREGENLQAVWSPDTKLVAILTSSFYLHIFKIQFTGKRIQIGGKQPSGLFLATISL
LLNEQVPFASKDLAISNIICDNKHMLVGLSDGSLYNVSWKGEFFGAFELDFHPQDNIEGA
KLSLSLDNGLASAGAQGVFKPDHYLSQRSAVIQLEFSLPLRLLFVLFSDGQLVLCTTSKK
GLKQAESIKAEKKLGSGDAVCASVASEQQIIAVGTRRGVVELYDLAESVSLIRSVSLYDW
GYSMDDTGAVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSVSSPMVKP
NLDCKYEPMMGGTSLLQWDEYGYRLYAIEERSSERIIAFSFGKCCLNRGVSGTTYVRQVI
YGEDRLLVVQSEETDELKLLHLNLPVSYISQNWPVLHVAASKDGMYLAVAGLHGLILYDI
RLKKWRVFGDITQEQKIECKGLLWLGKIVVVCNYINASNMYELLFYPRYHLDQSSLLYRK
ALIGKPMVMDVYQDYILVTYRPFDVHIFHVKLSGELTPSGAVDLQLSTVRELSIMTAKSD
PAAMRFIPDQLPRENISMNHISTSSDLLAKEPARCLILRVNGELSLLDLDDGRERELTDS
VELFWVTCGQSEEKTNLIEEVSWLDYGHRGMQVWYPSPGVDPFKQEDFLQLDPELEFDRE
VYPLGLLPNAGVVVGVSQRMSFSGCTEFPCFEPSPQAQTILHCLLRHLLQRDKSEEALRL
AQLSAEKPHFSHCMEWLLFTVFDADISRQNANKNQICVPKHATSSSLLEKTCDLIRNFPE
YFDVVVSVARKTDGRHWADLFSAAGRSTELFEECFQQRWYRTAACYILVIAKLEGPAVSQ
YCALRLLQATLDESLYELAGELVRFLLRSGREYEPASPDSEKLSPRFLGYFLFPSSNRSK
SLDPKSNSFKEHGAHVASVKNILENHASYLMSEKELSKLVAFVKGTQFDIVEYLQRERYG
SARLENFASGLELIGKKLQMSTLQSRLDADFLLAHMCSVKFKEWIVVLATLLRRSEVLFD
LFRHDMRLWKAYSITLQSHPAFAEYHDLLEALEERLSATASLEEK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtatattgcatatggatggcctcaagtgatccctctcgaatctggtctctgtcctgct
tctcagcagatcatctacctcaaagtcatcaatcgcttattgctcgtcgttgccccttct
catttcgagctatggagctcttctcagcacaaagtgagattggggaagtacaagagagat
tcggattcgattcaaagggagggcgagaatttgcaggctgtttggagtccagataccaaa
ttggtcgccattcttacctcttctttctatcttcacatttttaagatccagttcacggga
aaaagaatacaaattggagggaagcaaccatctggtttgtttctcgctactatatctcta
cttctgaacgagcaggtgccttttgctagcaaggacttggctataagcaatattatttgc
gataacaaacatatgctagttggattgtcagatggatctttgtataacgtatcttggaag
ggagagttctttggggcctttgaacttgactttcacccacaagacaacattgaaggcgct
aaattatcactttctctagacaatggtcttgcttcagctggggctcaaggagtttttaag
ccggatcattatttgtcccaaaggtctgctgttatccagctggagttttccttaccattg
aggttgctatttgtgctattctctgatggacaactggtgttatgtaccacaagcaagaaa
ggtttaaagcaagctgagtctattaaagctgaaaagaagttgggttctggtgatgctgta
tgtgcttcagtagcctctgagcaacaaatcatcgctgttggtaccagaaggggtgttgtt
gagttatatgaccttgcagaatctgtgtcacttattcgttccgtatctttgtatgactgg
ggatattcaatggatgacactggtgctgtgagttgtattgcatggacgcctgataattct
gcttttgcagttgggtggaagttaagaggactcacagtttggtccgtttctgggtgtcgc
ttgatgtctacaattcggcagattggtttaagttctgtatcttctccaatggttaaacca
aacctggattgcaagtatgaacctatgatgggtggcacctcactgttgcagtgggatgaa
tatggatataggctttatgctattgaggaacgatcttcagagagaataattgcattttct
tttggaaaatgttgccttaacagaggagtttcaggcacaacgtatgtccgccaagttatc
tacggtgaagatcgcttgcttgtcgtacaatctgaagaaactgatgagcttaaacttttg
catcttaatcttccagtttcatatatttctcaaaattggccagttctacatgtggctgcc
agcaaggatgggatgtacttggctgttgctggtcttcatggattaatattatatgatata
cggttaaaaaagtggcgagtttttggagatattacccaggagcaaaaaattgagtgcaaa
ggcttgttatggctggggaagattgttgttgtctgcaactacatcaatgcttctaacatg
tacgaactgcttttctatccaagataccaccttgatcagagttcgctactttataggaaa
gcattgattggaaagccaatggttatggatgtctatcaggattacattcttgtcacttat
cgcccatttgatgtccatatattccatgtgaaattatctggtgaattgacgccatctggt
gctgtggatttacagctttctacagtacgagagctctcaatcatgactgcgaaaagcgat
cctgctgcgatgcgttttatccctgatcagcttccaagagagaatatctcaatgaatcat
atctcaacttcatctgatttgttagccaaagagcctgctagatgtctgattttgcgagtg
aatggggagctatcgctactcgatttggatgatgggcgggaaagagagctcaccgactct
gttgaattgttctgggttacctgtggtcaatcagaggagaaaacaaacttaattgaggaa
gtttcatggttagattatggccaccgaggaatgcaggtttggtatccatctcctggtgtt
gacccttttaagcaggaagatttcttgcagttggatcctgagttggaatttgatagggag
gtatatcctcttggtcttcttccaaatgctggagtagtcgtcggtgtttcccagagaatg
tcgttttcagggtgcactgagtttccatgctttgagccgtctcctcaagctcaaactata
ttgcattgcctactccgacaccttcttcagagggataagagtgaagaagctttacggttg
gcacaattatcggcagaaaagcctcatttttcacattgcatggagtggctactttttacc
gtatttgatgctgatatttccaggcagaacgcaaacaaaaaccagatatgtgtcccaaag
catgctaccagctcctctcttttggagaagacctgtgatttgatcagaaattttcccgag
tattttgatgtggttgttagtgttgcaagaaaaaccgatggtcgacattgggcggatttg
ttttctgctgccggaagatcaactgagttgtttgaggaatgtttccaacaaagatggtac
cgaactgcagcttgctacatacttgtgattgctaaacttgagggtcctgctgtgagtcaa
tactgcgctttacgtttattacaggcaacgcttgatgagtctttgtacgaacttgctggg
gagcttgtgaggtttctcctgaggtctggaagggaatatgagcctgcttctccggattca
gagaaactatctcccaggtttttgggatattttcttttcccttctagtaacaggagcaag
tctttggacccaaaaagtaactcgttcaaagagcacggtgcacatgttgcttctgttaag
aacatcctcgaaaaccatgctagctatttaatgtcagagaaagaactttccaagcttgtt
gcatttgtaaaaggcactcaatttgatatagtggaatatcttcagcgagaaagatatgga
agtgctcgattggaaaattttgcttcgggacttgaattaattgggaagaagcttcaaatg
agtacattgcagagtcggttggacgcagattttcttttggctcacatgtgctctgtcaag
tttaaagagtggatagttgtattggccactcttttaaggcgatctgaggttctctttgat
ctatttcggcatgatatgcggttatggaaagcttatagcataactcttcagtcgcatcca
gcattcgctgaataccatgatttgcttgaagccctggaagagagactctcagctacagct
agtttggaagagaaatga
DBGET
integrated database retrieval system
