Cornus florida (flowering dogwood): 132299031
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Entry
132299031 CDS
T11641
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cflo Cornus florida (flowering dogwood)
Pathway
cflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132299031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cflo03019
]
132299031
Messenger RNA biogenesis [BR:
cflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
132299031
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
132299031
NCBI-ProteinID:
XP_059651440
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MVMSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPALQPNWQIGECVAIWW
RPNFETIMYPYCPPHITKAKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQVYG
GFSLCAVNCSRLYLFIFLFLWEYVLYFGNFPFFL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtcaccggtggtgaacacctaccctctatcgagctacactttcgggacgaaa
gagccaaagatggagaaagacacctcagtcgcagatcgtctcgctcgtatgaaagtcaac
tatatgaaagaaggaatgaggaccagtgttgaagcaatactactggtacaagagcataac
catccacacattcttcttctgcaaattggaaacacgttttgcaaactccctggtggtcgt
ttgaagccaggagaaaatgaaattgaaggcttgaaaaggaaattgagtagcaaacttgct
gctaattcgcctgcactacagcctaattggcagattggtgagtgtgttgctatctggtgg
aggccaaattttgaaactataatgtacccatactgtcctccacacatcacaaaagccaag
gaatgtaagaagctcttcctagttcacttgtctgaaagggagtactttgcagttccaaaa
aatctgaaattgctagctgttcccctatttgaactctatgataatgttcaggtgtatggt
ggcttctcattatgtgccgttaattgctcgaggctttatttatttatttttttatttttg
tgggaatatgtattatattttggaaatttccctttttttctataa
DBGET
integrated database retrieval system
